Guide to the Human Genome
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Name: IGFBP1 Sequence: fasta or formatted (259aa) NCBI GI: 4504615
Description:

insulin-like growth factor binding protein 1 precursor

Referenced in:

Growth Hormone and Related Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         28           2
 C cysteine            6.9         18           2
 D aspartate           2.7          7           1
 E glutamate           8.9         23           3
 F phenylalanine       1.5          4           1
 G glycine             7.3         19           1
 H histidine           2.3          6           1
 I isoleucine          3.5          9           1
 K lysine              3.5          9           2
 L leucine             8.5         22           4
 M methionine          1.5          4           1
 N asparagine          3.5          9           1
 P proline             7.3         19           2
 Q glutamine           3.9         10           2
 R arginine            4.2         11           1
 S serine              8.5         22           1
 T threonine           4.2         11           1
 V valine              6.2         16           2
 W tryptophan          2.3          6           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor binding protein 1 precurso... 
IGFBP2                0.241   insulin-like growth factor binding protein 2, 36kDa ...
IGFBP4                0.228   insulin-like growth factor binding protein 4 precurs...
IGFBP5                0.207   insulin-like growth factor binding protein 5 
IGFBP3                0.189   insulin-like growth factor binding protein 3 isoform...
IGFBP3                0.184   insulin-like growth factor binding protein 3 isoform...
IGFBP6                0.134   insulin-like growth factor binding protein 6 
HTRA1                 0.057   HtrA serine peptidase 1 precursor 
SMOC2                 0.042   SPARC related modular calcium binding 2 
IGFBP7                0.042   insulin-like growth factor binding protein 7 
TG                    0.038   thyroglobulin 
SPOCK1                0.038   sparc/osteonectin, cwcv and kazal-like domains proteo...
SMOC1                 0.036   secreted modular calcium-binding protein 1 isoform 1...
SMOC1                 0.036   secreted modular calcium-binding protein 1 isoform 2...
SPOCK2                0.034   sparc/osteonectin, cwcv and kazal-like domains proteo...
IGFBPL1               0.034   insulin-like growth factor binding protein-like 1 [H...
SPOCK3                0.034   testican 3 isoform 1 
SPOCK3                0.034   testican 3 isoform 2 
CD74                  0.033   CD74 antigen isoform a 
WISP1                 0.031   WNT1 inducible signaling pathway protein 1 isoform 2...
NID2                  0.029   nidogen 2 precursor 
ESM1                  0.019   endothelial cell-specific molecule 1 isoform b prec...
WISP2                 0.019   WNT1 inducible signaling pathway protein 2 precursor ...
NOV                   0.019   nephroblastoma overexpressed precursor 
CTGF                  0.019   connective tissue growth factor 
ESM1                  0.019   endothelial cell-specific molecule 1 isoform a precur...
CRIM1                 0.015   cysteine-rich motor neuron 1 
NID1                  0.015   nidogen 1 precursor 
WISP1                 0.015   WNT1 inducible signaling pathway protein 1 isoform 1 ...
LCE1B                 0.013   late cornified envelope 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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