Guide to the Human Genome
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Name: LRRC26 Sequence: fasta or formatted (334aa) NCBI GI: 61966761
Description:

leucine rich repeat containing 26

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.2         54           4
 C cysteine            3.6         12           1
 D aspartate           3.6         12           1
 E glutamate           2.1          7           1
 F phenylalanine       1.8          6           1
 G glycine             7.8         26           2
 H histidine           2.1          7           1
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine            20.7         69           8
 M methionine          0.3          1           1
 N asparagine          2.4          8           1
 P proline            11.7         39           2
 Q glutamine           2.1          7           1
 R arginine            9.0         30           4
 S serine              7.8         26           1
 T threonine           2.7          9           1
 V valine              3.9         13           2
 W tryptophan          2.1          7           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 26 
LRRC55                0.154   leucine rich repeat containing 55 
LRRC38                0.150   PREDICTED: leucine rich repeat containing 38, parti...
LRRC38                0.148   PREDICTED: leucine rich repeat containing 38 
LRRC38                0.148   PREDICTED: leucine rich repeat containing 38 
SLIT1                 0.145   slit homolog 1 
LRRC24                0.139   leucine rich repeat containing 24 
ISLR2                 0.138   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.138   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.138   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.138   immunoglobulin superfamily containing leucine-rich ...
LRTM2                 0.128   leucine-rich repeats and transmembrane domains 2 [Ho...
SLIT3                 0.124   slit homolog 3 
IGSF10                0.124   immunoglobulin superfamily, member 10 
SLIT2                 0.122   slit homolog 2 
CHADL                 0.119   chondroadherin-like 
KIAA0644              0.118   hypothetical protein LOC9865 
ISLR                  0.116   immunoglobulin superfamily containing leucine-rich r...
ISLR                  0.116   immunoglobulin superfamily containing leucine-rich re...
LOC441617             0.112   PREDICTED: similar to hCG1820409 
LOC441617             0.112   PREDICTED: similar to hCG1820409 
IGFALS                0.110   insulin-like growth factor binding protein, acid la...
RTN4R                 0.110   reticulon 4 receptor precursor 
RTN4RL2               0.110   reticulon 4 receptor-like 2 
LRTM1                 0.110   leucine-rich repeats and transmembrane domains 1 [Ho...
LRRC52                0.109   leucine rich repeat containing 52 
IGFALS                0.107   insulin-like growth factor binding protein, acid labi...
VASN                  0.107   slit-like 2 
GP5                   0.104   glycoprotein V (platelet) 
LINGO4                0.104   leucine rich repeat and Ig domain containing 4 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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