Guide to the Human Genome
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Name: ISLR Sequence: fasta or formatted (428aa) NCBI GI: 41582239
Description:

immunoglobulin superfamily containing leucine-rich repeat

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [428aa] immunoglobulin superfamily containing leucine-rich repeat
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         39           2
 C cysteine            2.6         11           1
 D aspartate           4.4         19           1
 E glutamate           5.6         24           2
 F phenylalanine       4.0         17           3
 G glycine             7.9         34           2
 H histidine           3.0         13           1
 I isoleucine          3.5         15           2
 K lysine              1.9          8           1
 L leucine            15.4         66           4
 M methionine          0.5          2           1
 N asparagine          4.0         17           1
 P proline             8.2         35           2
 Q glutamine           4.4         19           1
 R arginine            3.7         16           2
 S serine              8.2         35           2
 T threonine           5.4         23           2
 V valine              5.1         22           2
 W tryptophan          1.6          7           2
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin superfamily containing leucine-rich r... 
ISLR                  1.000   immunoglobulin superfamily containing leucine-rich re...
ISLR2                 0.422   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.422   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.422   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.422   immunoglobulin superfamily containing leucine-rich ...
SLIT2                 0.112   slit homolog 2 
PXDN                  0.111   peroxidasin 
LRTM1                 0.111   leucine-rich repeats and transmembrane domains 1 [Ho...
SLIT1                 0.108   slit homolog 1 
SLIT3                 0.105   slit homolog 3 
LRFN4                 0.104   leucine rich repeat and fibronectin type III domain ...
LRTM2                 0.101   leucine-rich repeats and transmembrane domains 2 [Ho...
LRIT1                 0.100   retina specific protein PAL 
LRFN3                 0.097   leucine rich repeat and fibronectin type III domain ...
PXDNL                 0.097   peroxidasin homolog-like 
LINGO3                0.091   leucine rich repeat and Ig domain containing 3 [Hom...
LRRN2                 0.091   leucine rich repeat neuronal 2 
LRRN2                 0.091   leucine rich repeat neuronal 2 
LRRC26                0.090   leucine rich repeat containing 26 
MXRA5                 0.088   adlican 
CPN2                  0.087   carboxypeptidase N, polypeptide 2, 83kD 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRN3                 0.087   leucine rich repeat neuronal 3 
LRRC24                0.087   leucine rich repeat containing 24 
LGR4                  0.086   leucine-rich repeat-containing G protein-coupled re...
LRRC4B                0.084   leucine rich repeat containing 4B 
LRRC38                0.084   PREDICTED: leucine rich repeat containing 38, parti...
LRFN5                 0.084   leucine rich repeat and fibronectin type III domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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