LRTM1 76

Name: LRTM1	Sequence: fasta or formatted (345aa)		NCBI GI: 10190722
Description: leucine-rich repeats and transmembrane domains 1		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 22 3 C cysteine 3.8 13 1 D aspartate 3.5 12 1 E glutamate 5.2 18 2 F phenylalanine 2.3 8 1 G glycine 5.5 19 2 H histidine 4.1 14 2 I isoleucine 4.1 14 2 K lysine 3.8 13 1 L leucine 16.8 58 4 M methionine 1.4 5 2 N asparagine 5.2 18 2 P proline 7.5 26 2 Q glutamine 6.1 21 2 R arginine 3.5 12 1 S serine 7.8 27 2 T threonine 4.3 15 1 V valine 5.2 18 2 W tryptophan 1.7 6 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich repeats and transmembrane domains 1 [Ho... LRTM2 0.282 leucine-rich repeats and transmembrane domains 2 [Ho... ISLR 0.137 immunoglobulin superfamily containing leucine-rich r... ISLR 0.137 immunoglobulin superfamily containing leucine-rich re... SLIT3 0.137 slit homolog 3 SLIT2 0.130 slit homolog 2 LRRC24 0.127 leucine rich repeat containing 24 SLIT1 0.124 slit homolog 1 ISLR2 0.115 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.115 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.115 immunoglobulin superfamily containing leucine-rich r... ISLR2 0.115 immunoglobulin superfamily containing leucine-rich ... LRRC15 0.114 leucine rich repeat containing 15 isoform a LRRC15 0.114 leucine rich repeat containing 15 isoform b SLITRK6 0.112 slit and trk like 6 SLITRK1 0.109 slit and trk like 1 protein RTN4RL2 0.106 reticulon 4 receptor-like 2 SLITRK3 0.105 slit and trk like 3 protein CHAD 0.105 chondroadherin precursor LRRC38 0.105 PREDICTED: leucine rich repeat containing 38, parti... LRRC26 0.105 leucine rich repeat containing 26 SLITRK5 0.103 SLIT and NTRK-like family, member 5 PXDN 0.103 peroxidasin CPN2 0.102 carboxypeptidase N, polypeptide 2, 83kD LRRTM2 0.100 leucine rich repeat transmembrane neuronal 2 KIAA0644 0.100 hypothetical protein LOC9865 SLITRK2 0.099 SLIT and NTRK-like family, member 2 SLITRK2 0.099 SLIT and NTRK-like family, member 2 SLITRK2 0.099 SLIT and NTRK-like family, member 2 SLITRK2 0.099 SLIT and NTRK-like family, member 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.