Guide to the Human Genome
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Name: RTN4RL2 Sequence: fasta or formatted (420aa) NCBI GI: 30425563
Description:

reticulon 4 receptor-like 2

Referenced in:

Leucine-rich Repeat Family
Oligodendrocytes and Myelin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         38           2
 C cysteine            3.1         13           1
 D aspartate           4.8         20           2
 E glutamate           3.6         15           2
 F phenylalanine       3.6         15           1
 G glycine             7.4         31           2
 H histidine           2.9         12           2
 I isoleucine          1.0          4           1
 K lysine              0.0          0           0
 L leucine            19.5         82           4
 M methionine          1.0          4           1
 N asparagine          4.5         19           2
 P proline             8.6         36           2
 Q glutamine           4.5         19           1
 R arginine            8.6         36           2
 S serine              8.6         36           3
 T threonine           3.8         16           1
 V valine              2.1          9           1
 W tryptophan          1.2          5           1
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   reticulon 4 receptor-like 2 
RTN4RL1               0.391   reticulon 4 receptor-like 1 
RTN4R                 0.335   reticulon 4 receptor precursor 
LRRC24                0.135   leucine rich repeat containing 24 
CHADL                 0.133   chondroadherin-like 
LRRC4B                0.125   leucine rich repeat containing 4B 
VASN                  0.122   slit-like 2 
NYX                   0.121   nyctalopin precursor 
KIAA0644              0.118   hypothetical protein LOC9865 
IGFALS                0.115   insulin-like growth factor binding protein, acid la...
IGFALS                0.115   insulin-like growth factor binding protein, acid labi...
LRRC4C                0.115   netrin-G1 ligand 
LRRC4                 0.115   leucine rich repeat containing 4 
GP5                   0.114   glycoprotein V (platelet) 
LRRC15                0.112   leucine rich repeat containing 15 isoform a 
LRRC15                0.112   leucine rich repeat containing 15 isoform b 
TPBG                  0.111   trophoblast glycoprotein 
LRRN2                 0.110   leucine rich repeat neuronal 2 
LRRN2                 0.110   leucine rich repeat neuronal 2 
IGSF10                0.110   immunoglobulin superfamily, member 10 
LRRTM2                0.109   leucine rich repeat transmembrane neuronal 2 
CPN2                  0.109   carboxypeptidase N, polypeptide 2, 83kD 
LRRC70                0.105   synleurin 
LRIG3                 0.104   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.104   leucine-rich repeats and immunoglobulin-like domain...
CHAD                  0.099   chondroadherin precursor 
LGR4                  0.099   leucine-rich repeat-containing G protein-coupled re...
LINGO3                0.098   leucine rich repeat and Ig domain containing 3 [Hom...
LRIG2                 0.098   leucine-rich repeats and immunoglobulin-like domains ...
LRG1                  0.097   leucine-rich alpha-2-glycoprotein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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