Guide to the Human Genome
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Name: LRRC24 Sequence: fasta or formatted (513aa) NCBI GI: 229089140
Description:

leucine rich repeat containing 24

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.6         70           3
 C cysteine            2.7         14           1
 D aspartate           2.5         13           1
 E glutamate           5.7         29           2
 F phenylalanine       2.3         12           1
 G glycine             8.0         41           2
 H histidine           1.9         10           1
 I isoleucine          2.7         14           1
 K lysine              1.4          7           2
 L leucine            17.7         91           6
 M methionine          1.2          6           1
 N asparagine          2.9         15           2
 P proline             8.6         44           4
 Q glutamine           5.3         27           2
 R arginine            9.2         47           6
 S serine              5.1         26           2
 T threonine           3.1         16           1
 V valine              3.9         20           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine rich repeat containing 24 
RTN4RL2               0.121   reticulon 4 receptor-like 2 
PXDN                  0.111   peroxidasin 
LRFN3                 0.107   leucine rich repeat and fibronectin type III domain ...
SLIT3                 0.105   slit homolog 3 
RTN4R                 0.104   reticulon 4 receptor precursor 
LRFN1                 0.103   leucine rich repeat and fibronectin type III domain...
SLIT1                 0.103   slit homolog 1 
LINGO3                0.101   leucine rich repeat and Ig domain containing 3 [Hom...
LRFN4                 0.099   leucine rich repeat and fibronectin type III domain ...
LRIT1                 0.099   retina specific protein PAL 
AMIGO3                0.097   adhesion molecule with Ig-like domain 3 
SLIT2                 0.097   slit homolog 2 
LINGO4                0.094   leucine rich repeat and Ig domain containing 4 [Homo...
LRRC4B                0.093   leucine rich repeat containing 4B 
LRRC4C                0.093   netrin-G1 ligand 
ISLR2                 0.092   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.092   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 0.092   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 0.092   immunoglobulin superfamily containing leucine-rich ...
PXDNL                 0.092   peroxidasin homolog-like 
RTN4RL1               0.092   reticulon 4 receptor-like 1 
LRRC26                0.091   leucine rich repeat containing 26 
LRIG3                 0.088   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.088   leucine-rich repeats and immunoglobulin-like domain...
LRRC4                 0.088   leucine rich repeat containing 4 
LRTM1                 0.087   leucine-rich repeats and transmembrane domains 1 [Ho...
VASN                  0.086   slit-like 2 
LRIG1                 0.086   leucine-rich repeats and immunoglobulin-like domains...
CPN2                  0.084   carboxypeptidase N, polypeptide 2, 83kD 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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