Guide to the Human Genome
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Name: ISLR2 Sequence: fasta or formatted (745aa) NCBI GI: 194306621
Description:

immunoglobulin superfamily containing leucine-rich repeat 2

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [745aa] immunoglobulin superfamily containing leucine-rich repeat 2
alt mRNA [745aa] immunoglobulin superfamily containing leucine-rich repeat 2
alt mRNA [745aa] immunoglobulin superfamily containing leucine-rich repeat 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         92           2
 C cysteine            2.3         17           2
 D aspartate           3.9         29           2
 E glutamate           7.8         58           2
 F phenylalanine       2.1         16           1
 G glycine             9.3         69           3
 H histidine           2.3         17           1
 I isoleucine          2.1         16           1
 K lysine              2.8         21           2
 L leucine            12.5         93           2
 M methionine          0.4          3           1
 N asparagine          3.4         25           3
 P proline             9.1         68           2
 Q glutamine           3.9         29           1
 R arginine            5.4         40           2
 S serine              6.6         49           2
 T threonine           4.0         30           2
 V valine              6.4         48           2
 W tryptophan          1.5         11           1
 Y tyrosine            1.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin superfamily containing leucine-rich ... 
ISLR2                 1.000   immunoglobulin superfamily containing leucine-rich ...
ISLR2                 1.000   immunoglobulin superfamily containing leucine-rich r...
ISLR2                 1.000   immunoglobulin superfamily containing leucine-rich ...
ISLR                  0.241   immunoglobulin superfamily containing leucine-rich r...
ISLR                  0.241   immunoglobulin superfamily containing leucine-rich re...
LRFN3                 0.066   leucine rich repeat and fibronectin type III domain ...
LRFN4                 0.065   leucine rich repeat and fibronectin type III domain ...
LRRC24                0.063   leucine rich repeat containing 24 
SLIT1                 0.061   slit homolog 1 
SLIT2                 0.061   slit homolog 2 
LRRC26                0.061   leucine rich repeat containing 26 
SLIT3                 0.060   slit homolog 3 
LRIT3                 0.060   leucine-rich repeat, immunoglobulin-like and transm...
PXDN                  0.057   peroxidasin 
LRRN2                 0.055   leucine rich repeat neuronal 2 
LRRN2                 0.055   leucine rich repeat neuronal 2 
MXRA5                 0.055   adlican 
LRIT1                 0.054   retina specific protein PAL 
LRTM1                 0.053   leucine-rich repeats and transmembrane domains 1 [Ho...
LRFN5                 0.050   leucine rich repeat and fibronectin type III domain ...
LRRC4C                0.049   netrin-G1 ligand 
CHADL                 0.047   chondroadherin-like 
LRTM2                 0.047   leucine-rich repeats and transmembrane domains 2 [Ho...
LOC441617             0.046   PREDICTED: similar to hCG1820409 
LOC441617             0.046   PREDICTED: similar to hCG1820409 
CPN2                  0.046   carboxypeptidase N, polypeptide 2, 83kD 
GPR125                0.046   G protein-coupled receptor 125 
LGR4                  0.046   leucine-rich repeat-containing G protein-coupled re...
LRIT2                 0.045   leucine rich repeat containing 22 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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