Guide to the Human Genome
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Name: KIAA0644 Sequence: fasta or formatted (811aa) NCBI GI: 76880480
Description:

hypothetical protein LOC9865

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         84           4
 C cysteine            2.1         17           1
 D aspartate           4.4         36           2
 E glutamate           4.4         36           2
 F phenylalanine       3.5         28           1
 G glycine             8.5         69           3
 H histidine           3.0         24           1
 I isoleucine          1.4         11           1
 K lysine              2.0         16           2
 L leucine            17.0        138           3
 M methionine          0.7          6           1
 N asparagine          3.3         27           2
 P proline             7.6         62           2
 Q glutamine           4.3         35           3
 R arginine           10.0         81           3
 S serine              7.0         57           2
 T threonine           3.8         31           2
 V valine              3.9         32           2
 W tryptophan          1.1          9           1
 Y tyrosine            1.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9865 
CPN2                  0.099   carboxypeptidase N, polypeptide 2, 83kD 
LRRC70                0.088   synleurin 
LRRC15                0.087   leucine rich repeat containing 15 isoform a 
LRRC15                0.087   leucine rich repeat containing 15 isoform b 
IGFALS                0.083   insulin-like growth factor binding protein, acid la...
IGFALS                0.083   insulin-like growth factor binding protein, acid labi...
LRRN2                 0.070   leucine rich repeat neuronal 2 
LRRN2                 0.070   leucine rich repeat neuronal 2 
GP5                   0.070   glycoprotein V (platelet) 
LINGO3                0.069   leucine rich repeat and Ig domain containing 3 [Hom...
LINGO4                0.068   leucine rich repeat and Ig domain containing 4 [Homo...
NYX                   0.068   nyctalopin precursor 
RXFP2                 0.067   relaxin/insulin-like family peptide receptor 2 [Homo...
SLIT2                 0.067   slit homolog 2 
LRIG3                 0.066   leucine-rich repeats and immunoglobulin-like domains...
LRIG3                 0.066   leucine-rich repeats and immunoglobulin-like domain...
VASN                  0.066   slit-like 2 
LGR5                  0.065   leucine-rich repeat-containing G protein-coupled rece...
LRIG2                 0.063   leucine-rich repeats and immunoglobulin-like domains ...
RTN4R                 0.063   reticulon 4 receptor precursor 
LRRTM2                0.062   leucine rich repeat transmembrane neuronal 2 
RXFP1                 0.061   relaxin/insulin-like family peptide receptor 1 [Homo...
RTN4RL2               0.061   reticulon 4 receptor-like 2 
LINGO2                0.061   leucine rich repeat and Ig domain containing 2 [Homo...
CHADL                 0.060   chondroadherin-like 
PODNL1                0.060   podocan-like 1 isoform 2 
PODNL1                0.060   podocan-like 1 isoform 1 
LRRTM1                0.060   leucine rich repeat transmembrane neuronal 1 
LRRTM3                0.060   leucine rich repeat transmembrane neuronal 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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