Guide to the Human Genome
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Name: IGFALS Sequence: fasta or formatted (643aa) NCBI GI: 225579152
Description:

insulin-like growth factor binding protein, acid labile subunit isoform 1 precursor

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt prot [605aa] insulin-like growth factor binding protein, acid labile subunit i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         60           2
 C cysteine            2.2         14           1
 D aspartate           4.2         27           3
 E glutamate           5.4         35           2
 F phenylalanine       3.9         25           1
 G glycine             9.0         58           2
 H histidine           2.5         16           1
 I isoleucine          1.2          8           1
 K lysine              1.6         10           1
 L leucine            21.5        138           4
 M methionine          0.3          2           1
 N asparagine          5.3         34           2
 P proline             6.7         43           3
 Q glutamine           4.0         26           1
 R arginine            7.5         48           2
 S serine              6.2         40           2
 T threonine           2.8         18           1
 V valine              3.6         23           2
 W tryptophan          1.6         10           1
 Y tyrosine            1.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor binding protein, acid la... 
IGFALS                0.928   insulin-like growth factor binding protein, acid labi...
LRRC15                0.131   leucine rich repeat containing 15 isoform a 
LRRC15                0.131   leucine rich repeat containing 15 isoform b 
LRIG1                 0.126   leucine-rich repeats and immunoglobulin-like domains...
LGR4                  0.116   leucine-rich repeat-containing G protein-coupled re...
LGR6                  0.112   leucine-rich repeat-containing G protein-coupled rec...
LRIG3                 0.108   leucine-rich repeats and immunoglobulin-like domains...
CHADL                 0.108   chondroadherin-like 
GP5                   0.107   glycoprotein V (platelet) 
KIAA0644              0.105   hypothetical protein LOC9865 
CPN2                  0.105   carboxypeptidase N, polypeptide 2, 83kD 
PODNL1                0.102   podocan-like 1 isoform 1 
PODNL1                0.101   podocan-like 1 isoform 2 
LGR6                  0.100   leucine-rich repeat-containing G protein-coupled rec...
LGR5                  0.098   leucine-rich repeat-containing G protein-coupled rece...
TLR9                  0.096   toll-like receptor 9 isoform A precursor 
LRRC32                0.095   leucine rich repeat containing 32 precursor 
LRRC32                0.095   leucine rich repeat containing 32 precursor 
LINGO3                0.094   leucine rich repeat and Ig domain containing 3 [Hom...
TLR3                  0.094   toll-like receptor 3 
LINGO4                0.093   leucine rich repeat and Ig domain containing 4 [Homo...
LRRC70                0.092   synleurin 
MFHAS1                0.090   malignant fibrous histiocytoma amplified sequence 1...
LRIG3                 0.090   leucine-rich repeats and immunoglobulin-like domain...
PODN                  0.090   podocan 
LINGO2                0.087   leucine rich repeat and Ig domain containing 2 [Homo...
LRIG2                 0.087   leucine-rich repeats and immunoglobulin-like domains ...
LRRC4B                0.086   leucine rich repeat containing 4B 
RTN4R                 0.083   reticulon 4 receptor precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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