Guide to the Human Genome
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Name: EGFL8 Sequence: fasta or formatted (293aa) NCBI GI: 13449287
Description:

NG3 protein

Referenced in:

Epidermal Growth Factor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         19           1
 C cysteine            7.2         21           2
 D aspartate           3.1          9           1
 E glutamate           8.9         26           2
 F phenylalanine       1.4          4           1
 G glycine             9.9         29           2
 H histidine           3.4         10           2
 I isoleucine          2.4          7           1
 K lysine              3.1          9           2
 L leucine            10.9         32           4
 M methionine          1.4          4           1
 N asparagine          1.7          5           1
 P proline             5.5         16           2
 Q glutamine           4.4         13           2
 R arginine            7.8         23           2
 S serine              6.5         19           1
 T threonine           4.4         13           1
 V valine              7.5         22           2
 W tryptophan          2.0          6           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NG3 protein 
EGFL7                 0.226   EGF-like-domain, multiple 7 
EGFL7                 0.226   EGF-like-domain, multiple 7 
MEGF6                 0.112   EGF-like-domain, multiple 3 
EGFL6                 0.090   epidermal growth factor-like protein 6 precursor [Ho...
NPNT                  0.089   nephronectin 
FBN2                  0.074   fibrillin 2 precursor 
NELL1                 0.072   nel-like 1 isoform 1 precursor 
NELL1                 0.070   nel-like 1 isoform 2 precursor 
FBN3                  0.067   fibrillin 3 precursor 
NOTCH4                0.065   notch4 preproprotein 
MEGF11                0.065   multiple EGF-like-domains 11 
SVEP1                 0.062   polydom 
JAG2                  0.062   jagged 2 isoform b precursor 
JAG2                  0.062   jagged 2 isoform a precursor 
JAG1                  0.060   jagged 1 precursor 
FBLN7                 0.060   fibulin 7 isoform 2 
NOTCH3                0.060   Notch homolog 3 
MEGF10                0.060   multiple EGF-like-domains 10 
NOTCH2                0.059   notch 2 preproprotein 
NELL2                 0.059   NEL-like protein 2 isoform d 
NELL2                 0.059   NEL-like protein 2 isoform c 
NELL2                 0.059   NEL-like protein 2 isoform b precursor 
NELL2                 0.059   NEL-like protein 2 isoform a 
NELL2                 0.059   NEL-like protein 2 isoform b precursor 
PEAR1                 0.059   platelet endothelial aggregation receptor 1 
CRB1                  0.059   crumbs homolog 1 precursor 
PROZ                  0.059   protein Z, vitamin K-dependent plasma glycoprotein [H...
FBN1                  0.057   fibrillin 1 precursor 
HEG1                  0.057   HEG homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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