Guide to the Human Genome
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Name: NELL1 Sequence: fasta or formatted (810aa) NCBI GI: 222352164
Description:

nel-like 1 isoform 1 precursor

Referenced in:

Epidermal Growth Factor

Other entries for this name:
alt prot [763aa] nel-like 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         34           2
 C cysteine           11.1         90           2
 D aspartate           6.2         50           2
 E glutamate           6.0         49           2
 F phenylalanine       2.3         19           1
 G glycine             7.8         63           2
 H histidine           3.8         31           1
 I isoleucine          4.8         39           2
 K lysine              4.3         35           1
 L leucine             7.5         61           3
 M methionine          1.6         13           1
 N asparagine          5.1         41           2
 P proline             4.7         38           2
 Q glutamine           3.6         29           2
 R arginine            4.8         39           2
 S serine              7.0         57           2
 T threonine           5.4         44           2
 V valine              5.6         45           2
 W tryptophan          1.4         11           1
 Y tyrosine            2.7         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nel-like 1 isoform 1 precursor 
NELL1                 0.903   nel-like 1 isoform 2 precursor 
NELL2                 0.580   NEL-like protein 2 isoform d 
NELL2                 0.580   NEL-like protein 2 isoform b precursor 
NELL2                 0.580   NEL-like protein 2 isoform a 
NELL2                 0.580   NEL-like protein 2 isoform b precursor 
NELL2                 0.580   NEL-like protein 2 isoform c 
FBN3                  0.078   fibrillin 3 precursor 
FBN2                  0.075   fibrillin 2 precursor 
FBN1                  0.074   fibrillin 1 precursor 
CRIM1                 0.070   cysteine-rich motor neuron 1 
EMR1                  0.068   egf-like module containing, mucin-like, hormone rece...
HMCN1                 0.068   hemicentin 1 
KCP                   0.066   cysteine rich BMP regulator 2 isoform 1 
KCP                   0.065   cysteine rich BMP regulator 2 isoform 2 
NOTCH1                0.062   notch1 preproprotein 
NOTCH3                0.062   Notch homolog 3 
FBLN1                 0.062   fibulin 1 isoform D 
FBLN2                 0.062   fibulin 2 isoform b precursor 
FBLN2                 0.062   fibulin 2 isoform a precursor 
FBLN1                 0.061   fibulin 1 isoform B precursor 
FBLN1                 0.061   fibulin 1 isoform A precursor 
FBLN1                 0.061   fibulin 1 isoform C precursor 
JAG2                  0.060   jagged 2 isoform a precursor 
LTBP2                 0.060   latent transforming growth factor beta binding protei...
FBLN5                 0.060   fibulin 5 precursor 
LTBP4                 0.060   latent transforming growth factor beta binding prot...
LTBP4                 0.060   latent transforming growth factor beta binding prot...
LTBP4                 0.060   latent transforming growth factor beta binding prot...
NOTCH4                0.059   notch4 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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