Guide to the Human Genome
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Name: FBLN7 Sequence: fasta or formatted (393aa) NCBI GI: 189491647
Description:

fibulin 7 isoform 2

Referenced in:

Extracellular Matrix

Other entries for this name:
alt prot [439aa] fibulin 7 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         18           2
 C cysteine            6.6         26           1
 D aspartate           3.6         14           1
 E glutamate           4.6         18           1
 F phenylalanine       3.6         14           1
 G glycine             9.2         36           2
 H histidine           2.5         10           1
 I isoleucine          2.8         11           1
 K lysine              2.5         10           1
 L leucine             8.7         34           4
 M methionine          1.8          7           1
 N asparagine          4.6         18           1
 P proline             8.4         33           2
 Q glutamine           6.4         25           2
 R arginine            6.9         27           1
 S serine              8.4         33           2
 T threonine           5.6         22           2
 V valine              6.9         27           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibulin 7 isoform 2 
FBLN7                 0.973   fibulin 7 isoform 1 
FBLN1                 0.164   fibulin 1 isoform C precursor 
FBLN5                 0.140   fibulin 5 precursor 
FBLN2                 0.139   fibulin 2 isoform b precursor 
FBLN2                 0.139   fibulin 2 isoform a precursor 
FBLN1                 0.116   fibulin 1 isoform D 
EFEMP2                0.115   EGF-containing fibulin-like extracellular matrix pr...
EFEMP1                0.112   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.112   EGF-containing fibulin-like extracellular matrix pro...
EFEMP1                0.112   EGF-containing fibulin-like extracellular matrix prot...
FBLN1                 0.097   fibulin 1 isoform B precursor 
SNED1                 0.097   6720455I24Rik homolog 
HMCN1                 0.093   hemicentin 1 
LTBP4                 0.093   latent transforming growth factor beta binding prot...
LTBP4                 0.093   latent transforming growth factor beta binding prot...
LTBP4                 0.093   latent transforming growth factor beta binding prot...
NOTCH1                0.092   notch1 preproprotein 
HMCN2                 0.090   PREDICTED: hemicentin 2 
HMCN2                 0.090   PREDICTED: hemicentin 2 
HMCN2                 0.090   PREDICTED: hemicentin 2 
FBLN1                 0.090   fibulin 1 isoform A precursor 
LTBP1                 0.089   latent transforming growth factor beta binding prote...
LTBP1                 0.089   latent transforming growth factor beta binding prote...
NOTCH2                0.088   notch 2 preproprotein 
FBN3                  0.088   fibrillin 3 precursor 
FBN1                  0.087   fibrillin 1 precursor 
FBN2                  0.087   fibrillin 2 precursor 
NOTCH4                0.086   notch4 preproprotein 
SVEP1                 0.084   polydom 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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