Guide to the Human Genome
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Name: NELL1 Sequence: fasta or formatted (763aa) NCBI GI: 222352166
Description:

nel-like 1 isoform 2 precursor

Referenced in:

Epidermal Growth Factor

Other entries for this name:
alt prot [810aa] nel-like 1 isoform 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         34           2
 C cysteine           11.0         84           2
 D aspartate           6.0         46           2
 E glutamate           5.8         44           2
 F phenylalanine       2.4         18           1
 G glycine             7.6         58           2
 H histidine           3.5         27           1
 I isoleucine          4.6         35           2
 K lysine              4.6         35           1
 L leucine             7.7         59           3
 M methionine          1.7         13           1
 N asparagine          5.1         39           2
 P proline             4.8         37           2
 Q glutamine           3.8         29           2
 R arginine            4.8         37           2
 S serine              6.7         51           2
 T threonine           5.6         43           2
 V valine              5.8         44           2
 W tryptophan          1.3         10           1
 Y tyrosine            2.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nel-like 1 isoform 2 precursor 
NELL1                 0.987   nel-like 1 isoform 1 precursor 
NELL2                 0.558   NEL-like protein 2 isoform d 
NELL2                 0.558   NEL-like protein 2 isoform b precursor 
NELL2                 0.558   NEL-like protein 2 isoform a 
NELL2                 0.558   NEL-like protein 2 isoform b precursor 
NELL2                 0.558   NEL-like protein 2 isoform c 
CRIM1                 0.070   cysteine-rich motor neuron 1 
KCP                   0.068   cysteine rich BMP regulator 2 isoform 2 
KCP                   0.068   cysteine rich BMP regulator 2 isoform 1 
FBN3                  0.064   fibrillin 3 precursor 
FBN1                  0.062   fibrillin 1 precursor 
NOTCH1                0.060   notch1 preproprotein 
FBN2                  0.059   fibrillin 2 precursor 
NOTCH2                0.057   notch 2 preproprotein 
FRAS1                 0.056   Fraser syndrome 1 
LTBP2                 0.055   latent transforming growth factor beta binding protei...
JAG1                  0.054   jagged 1 precursor 
JAG2                  0.054   jagged 2 isoform a precursor 
FBLN1                 0.054   fibulin 1 isoform C precursor 
FBLN1                 0.053   fibulin 1 isoform B precursor 
FBLN1                 0.053   fibulin 1 isoform A precursor 
FBLN1                 0.053   fibulin 1 isoform D 
EMR1                  0.053   egf-like module containing, mucin-like, hormone rece...
JAG2                  0.052   jagged 2 isoform b precursor 
HMCN2                 0.051   PREDICTED: hemicentin 2 
HMCN2                 0.051   PREDICTED: hemicentin 2 
HMCN2                 0.051   PREDICTED: hemicentin 2 
SVEP1                 0.051   polydom 
NOTCH3                0.051   Notch homolog 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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