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Search of human proteins with 58331240
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58331240 fetuin B [Homo sapiens]
(382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58331240 fetuin B [Homo sapiens] 781 0.0
gi|156523970 alpha-2-HS-glycoprotein [Homo sapiens] 97 2e-20
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens] 79 5e-15
gi|4504893 kininogen 1 isoform 2 [Homo sapiens] 66 6e-11
gi|156231037 kininogen 1 isoform 1 [Homo sapiens] 66 6e-11
gi|20302139 cystatin F [Homo sapiens] 37 0.030
gi|4503105 cystatin SA precursor [Homo sapiens] 37 0.039
gi|4504421 hepatic leukemia factor [Homo sapiens] 36 0.066
gi|54633319 PDZ domain-containing guanine nucleotide exchange fa... 35 0.086
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens] 34 0.25
gi|19882251 cystatin SN precursor [Homo sapiens] 33 0.43
gi|196114970 protein tyrosine phosphatase, non-receptor type 12 ... 33 0.56
gi|196114967 protein tyrosine phosphatase, non-receptor type 12 ... 33 0.56
gi|196114951 protein tyrosine phosphatase, non-receptor type 12 ... 33 0.56
gi|27436974 potassium voltage-gated channel, Shab-related subfam... 33 0.56
gi|4503107 cystatin C precursor [Homo sapiens] 32 0.73
gi|4503109 cystatin S precursor [Homo sapiens] 32 0.73
gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens] 32 0.95
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 32 1.2
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 31 1.6
gi|54400758 DKFZP564O0823 protein [Homo sapiens] 31 1.6
gi|19882256 cystatin D precursor [Homo sapiens] 30 2.8
gi|119964726 insulin-like growth factor 2 receptor precursor [Ho... 30 4.7
gi|4759336 Fanconi anemia, complementation group G [Homo sapiens] 30 4.7
gi|188219599 N-myc and STAT interactor [Homo sapiens] 30 4.7
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 30 4.7
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 30 4.7
gi|4503113 cystatin M precursor [Homo sapiens] 29 6.2
gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Ho... 29 6.2
gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Ho... 29 6.2
>gi|58331240 fetuin B [Homo sapiens]
Length = 382
Score = 781 bits (2018), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MGLLLPLALCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGY 60
MGLLLPLALCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGY
Sbjct: 1 MGLLLPLALCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGY 60
Query: 61 VLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFESVYGQCKAI 120
VLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFESVYGQCKAI
Sbjct: 61 VLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFESVYGQCKAI 120
Query: 121 FYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNN 180
FYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNN
Sbjct: 121 FYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNN 180
Query: 181 ENTSKQYSLFKVTRASSQWVVGPSYFVEYLIKESPCTKSQASSCSLQSSDSVPVGLCKGS 240
ENTSKQYSLFKVTRASSQWVVGPSYFVEYLIKESPCTKSQASSCSLQSSDSVPVGLCKGS
Sbjct: 181 ENTSKQYSLFKVTRASSQWVVGPSYFVEYLIKESPCTKSQASSCSLQSSDSVPVGLCKGS 240
Query: 241 LTRTHWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGP 300
LTRTHWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGP
Sbjct: 241 LTRTHWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGP 300
Query: 301 RGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLVVLPFPK 360
RGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLVVLPFPK
Sbjct: 301 RGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLVVLPFPK 360
Query: 361 EKARTAECPGPAQNASPLVLPP 382
EKARTAECPGPAQNASPLVLPP
Sbjct: 361 EKARTAECPGPAQNASPLVLPP 382
>gi|156523970 alpha-2-HS-glycoprotein [Homo sapiens]
Length = 367
Score = 97.1 bits (240), Expect = 2e-20
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 20/301 (6%)
Query: 11 ILVLCCGAMSPPQLALNPSALLSR--GCNDSDVLAVAGFALRDINKDRKDGYVLRLNRVN 68
+L+LC + A + L+ R C+D + A A+ IN++ GY LN+++
Sbjct: 5 VLLLCLAQLWGCHSAPHGPGLIYRQPNCDDPETEEAALVAIDYINQNLPWGYKHTLNQID 64
Query: 69 DAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFE-SVYGQCK-AIFYMNNP 126
+ + + + G LF + +D LET CHVL C +R E +V G C + ++
Sbjct: 65 EVKVWPQQPSGELFEIEIDTLETTCHVLDPTPVARCSVRQLKEHAVEGDCDFQLLKLDGK 124
Query: 127 SRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSSNHQVLEAATESLAKYNNENTSKQ 186
V+Y C P S + + C DCP P + + +V+ AA +LA +N +N
Sbjct: 125 FSVVYA---KCDSSPDSAEDVRKVCQDCPLLAPLNDT--RVVHAAKAALAAFNAQNNGSN 179
Query: 187 YSLFKVTRASSQWVVGPSYFVEYLIKESPCT---KSQASSCSLQSSDSVPVGLCKGSLTR 243
+ L +++RA + PS +VE+ + + C ++A+ C+L + G CK +L+
Sbjct: 180 FQLEEISRAQLV-PLPPSTYVEFTVSGTDCVAKEATEAAKCNLLAEKQ--YGFCKATLSE 236
Query: 244 THWEKFVSVTCDFFESQAPATGSENSAVNQK-PTNLPKVEESQQKNTPPTDSPSKAGPRG 302
V+VTC F++Q ++ + N+ PT V + +PP +P P G
Sbjct: 237 KLGGAEVAVTCMVFQTQPVSSQPQPEGANEAVPT---PVVDPDAPPSPPLGAPG-LPPAG 292
Query: 303 S 303
S
Sbjct: 293 S 293
>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
Length = 525
Score = 79.3 bits (194), Expect = 5e-15
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 13/176 (7%)
Query: 48 ALRDINKDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDC--- 104
AL INK R+DGY+ +L R+ DA R +++YL LDV E+DC VL +K W DC
Sbjct: 34 ALDLINKRRRDGYLFQLLRIADAHLDRVENT-TVYYLVLDVQESDCSVLSRKYWNDCEPP 92
Query: 105 GMRIFFESVYGQCKAIFYM-NNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCPSSIPTDSS 163
R E V GQCK I ++ S+ L + +NCT VS D P I
Sbjct: 93 DSRRPSEIVIGQCKVIATRHSHESQDLRVIDFNCTTSSVS--SALANTKDSPVLIDFFED 150
Query: 164 NHQVLEAATESLAKYNNENTSKQYSLFKVTR----ASSQWVVGPSYFVEYLIKESP 215
+ + A ++L KY EN ++ F+V R A + G YFV++ ++ P
Sbjct: 151 TERYRKQANKALEKYKEEN--DDFASFRVDRIERVARVRGGEGTGYFVDFSVRNCP 204
>gi|4504893 kininogen 1 isoform 2 [Homo sapiens]
Length = 427
Score = 65.9 bits (159), Expect = 6e-11
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 19/261 (7%)
Query: 36 CNDSDVLAVAGFALRDINKDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHV 95
CND D+ AL+ N + L R+ +A + G + + ++ E DC V
Sbjct: 28 CNDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEAT--KTVGSDTFYSFKYEIKEGDCPV 85
Query: 96 LRKKAWQDCGMRIFFESVYGQCKAIFYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCP 155
K WQDC + ++ G+C A + ++ +A C + P ++ + DC
Sbjct: 86 QSGKTWQDCEYKDAAKAATGECTATVGKRSSTK-FSVATQTCQITP-AEGPVVTAQYDCL 143
Query: 156 SSIPTDSSNHQVLEAATESLAKYNNENT--SKQYSLFKVTRASSQWVVGPSYFVEYLIKE 213
+ S+ LE +Y N NT S + L +V RA Q V G ++ + Y I +
Sbjct: 144 GCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQ 203
Query: 214 SPCTKSQ----ASSC-SLQSSDSVPVGLCKGSLTRTHWEKFVSVT--CDFFESQ---APA 263
+ C+K C SL + D+ G C + + S + CD + + P
Sbjct: 204 TNCSKENFLFLTPDCKSLWNGDT---GECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPP 260
Query: 264 TGSENSAVNQKPTNLPKVEES 284
T PTN P++EE+
Sbjct: 261 TKICVGCPRDIPTNSPELEET 281
Score = 58.5 bits (140), Expect = 1e-08
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 40 DVLAVAGFALRDINKDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKK 99
D+ + ++ N + + + LN V AQ GL F +T +++T+C K+
Sbjct: 155 DLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLN--FRITYSIVQTNCS---KE 209
Query: 100 AW----QDCGMRIFFESVYGQCKAIFYMNNPSRVLYLAAYNCTLRPVSK--KKIYMTCPD 153
+ DC + + G+C Y++ R+ + NC + P + C
Sbjct: 210 NFLFLTPDC--KSLWNGDTGECTDNAYIDIQLRIASFSQ-NCDIYPGKDFVQPPTKICVG 266
Query: 154 CPSSIPTDSSNHQVLEAATESLAKYNNENTSKQY-SLFKVTRASSQWVVGPSYFVEYLIK 212
CP IPT+S ++ E T ++ K N EN + Y + V +A Q V G YF++++ +
Sbjct: 267 CPRDIPTNSP--ELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVAR 324
Query: 213 ESPCTKSQASSCSLQSSDSVPVGL---CKGSLTRTHWEK--FVSVTC 254
E+ C+K + +S ++ +G C + WEK + +V C
Sbjct: 325 ETTCSKESNEELT-ESCETKKLGQSLDCNAEVYVVPWEKKIYPTVNC 370
>gi|156231037 kininogen 1 isoform 1 [Homo sapiens]
Length = 644
Score = 65.9 bits (159), Expect = 6e-11
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 19/261 (7%)
Query: 36 CNDSDVLAVAGFALRDINKDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHV 95
CND D+ AL+ N + L R+ +A + G + + ++ E DC V
Sbjct: 28 CNDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEAT--KTVGSDTFYSFKYEIKEGDCPV 85
Query: 96 LRKKAWQDCGMRIFFESVYGQCKAIFYMNNPSRVLYLAAYNCTLRPVSKKKIYMTCPDCP 155
K WQDC + ++ G+C A + ++ +A C + P ++ + DC
Sbjct: 86 QSGKTWQDCEYKDAAKAATGECTATVGKRSSTK-FSVATQTCQITP-AEGPVVTAQYDCL 143
Query: 156 SSIPTDSSNHQVLEAATESLAKYNNENT--SKQYSLFKVTRASSQWVVGPSYFVEYLIKE 213
+ S+ LE +Y N NT S + L +V RA Q V G ++ + Y I +
Sbjct: 144 GCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQ 203
Query: 214 SPCTKSQ----ASSC-SLQSSDSVPVGLCKGSLTRTHWEKFVSVT--CDFFESQ---APA 263
+ C+K C SL + D+ G C + + S + CD + + P
Sbjct: 204 TNCSKENFLFLTPDCKSLWNGDT---GECTDNAYIDIQLRIASFSQNCDIYPGKDFVQPP 260
Query: 264 TGSENSAVNQKPTNLPKVEES 284
T PTN P++EE+
Sbjct: 261 TKICVGCPRDIPTNSPELEET 281
Score = 58.5 bits (140), Expect = 1e-08
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 40 DVLAVAGFALRDINKDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKK 99
D+ + ++ N + + + LN V AQ GL F +T +++T+C K+
Sbjct: 155 DLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLN--FRITYSIVQTNCS---KE 209
Query: 100 AW----QDCGMRIFFESVYGQCKAIFYMNNPSRVLYLAAYNCTLRPVSK--KKIYMTCPD 153
+ DC + + G+C Y++ R+ + NC + P + C
Sbjct: 210 NFLFLTPDC--KSLWNGDTGECTDNAYIDIQLRIASFSQ-NCDIYPGKDFVQPPTKICVG 266
Query: 154 CPSSIPTDSSNHQVLEAATESLAKYNNENTSKQY-SLFKVTRASSQWVVGPSYFVEYLIK 212
CP IPT+S ++ E T ++ K N EN + Y + V +A Q V G YF++++ +
Sbjct: 267 CPRDIPTNSP--ELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFIDFVAR 324
Query: 213 ESPCTKSQASSCSLQSSDSVPVGL---CKGSLTRTHWEK--FVSVTC 254
E+ C+K + +S ++ +G C + WEK + +V C
Sbjct: 325 ETTCSKESNEELT-ESCETKKLGQSLDCNAEVYVVPWEKKIYPTVNC 370
>gi|20302139 cystatin F [Homo sapiens]
Length = 167
Score = 37.0 bits (84), Expect = 0.030
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 152 PDCPSSIPTDSSNHQVLEAATESLAKYNN-ENTSKQYSLFKVTRASSQWVVGPSYFVEYL 210
P P +I T+ VL+AA S+ K+NN N + ++TRA Q V G Y +E
Sbjct: 58 PGFPKTIKTNDPG--VLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVE 115
Query: 211 IKESPCTKSQ---ASSCSLQSSDSV 232
I + C K+Q C Q++ ++
Sbjct: 116 IGRTTCKKNQHLRLDDCDFQTNHTL 140
>gi|4503105 cystatin SA precursor [Homo sapiens]
Length = 141
Score = 36.6 bits (83), Expect = 0.039
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 161 DSSNHQVLEAATESLAKYNNENTSKQYS-LFKVTRASSQWVVGPSYFVEYLIKESPCTKS 219
D ++ +V A +++YN + Y L +V RA Q V G +YF + + + CTKS
Sbjct: 38 DLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKS 97
Query: 220 QAS--SCSLQSSDSV-PVGLCKGSLTRTHWEKFVSV 252
Q + +C+ + LC + WE +S+
Sbjct: 98 QPNLDTCAFHEQPELQKKQLCSFQIYEVPWEDRMSL 133
Score = 30.8 bits (68), Expect = 2.1
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 6 PLALCILVLCCGAMSPPQLALNPSALLSRGCNDSD-----VLAVAGFALRDINKDRKDGY 60
PL +L+L A++ ++ G D+D V F + + NK +D Y
Sbjct: 4 PLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEY 63
Query: 61 VLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDC 93
RL RV A+E GG+ ++ ++V T C
Sbjct: 64 YRRLLRVLRAREQIVGGVN--YFFDIEVGRTIC 94
>gi|4504421 hepatic leukemia factor [Homo sapiens]
Length = 295
Score = 35.8 bits (81), Expect = 0.066
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 310 LDDKNSQEKGPQEAF--PVHLDLTTNPQGETLDISFLFLEPMEEKLVVLPFPKEKARTAE 367
LDD+++ PQ AF P D T G+T + ++ LE + + P P + +
Sbjct: 50 LDDESNSPTVPQSAFLGPTLWDKTLPYDGDTFQLEYMDLEEFLSENGIPPSPSQHDHSPH 109
Query: 368 CPG--PAQNASPLVL 380
PG PA +A+P V+
Sbjct: 110 PPGLQPASSAAPSVM 124
>gi|54633319 PDZ domain-containing guanine nucleotide exchange factor
I [Homo sapiens]
Length = 1601
Score = 35.4 bits (80), Expect = 0.086
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 13/193 (6%)
Query: 145 KKIYMTCPDCPSSIPTD--SSNHQVLEAATESLAKYNNENTSKQYSLFKVTRASSQWVVG 202
K + C SS+ + S H ++EAA + + ++S + + S W
Sbjct: 1330 KPSLIKCLAVSSSVSNEEISQEHIIIEAADSGRGSWTSCSSSSHDNFQSLPNPKS-WDFL 1388
Query: 203 PSYFVEYL---IKESPCTKSQASSCSLQSSDSVPVGLCKGSLTRTHWEKFVSVTCDFFES 259
SY +L I E T S+ SCS S S G CKGSL R W S++ ++
Sbjct: 1389 NSYRHTHLDDPIAEVEPTDSEPYSCS--KSCSRTCGQCKGSLERKSWTSSSSLS----DT 1442
Query: 260 QAPATGS-ENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEK 318
P G+ + + P + + + P + + + +G + Y K+ + +
Sbjct: 1443 YEPNYGTVKRRVLESTPAESSEGLDPKDATDPVYKTVTSSTEKGLIVYCVTSPKKDDRYR 1502
Query: 319 GPQEAFPVHLDLT 331
P P +L ++
Sbjct: 1503 EPPPTPPGYLGIS 1515
>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
Length = 458
Score = 33.9 bits (76), Expect = 0.25
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 285 QQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFL 344
QQK+ P TD AG + P+ P++ VHLD Q E D+ L
Sbjct: 373 QQKSPPETDG---AGTDQPLSQKPEPSPSRQSSLVPEDIQVVHLDPGRQQQQEEEDLQKL 429
Query: 345 FLEPMEEKLVVLPFPKEKART----AECP 369
L+P L V P RT ECP
Sbjct: 430 SLQPPYYDLGVSPSYHPSVRTTEPRGECP 458
>gi|19882251 cystatin SN precursor [Homo sapiens]
Length = 141
Score = 33.1 bits (74), Expect = 0.43
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 161 DSSNHQVLEAATESLAKYNNENTSKQYSL-FKVTRASSQWVVGPSYFVEYLIKESPCTKS 219
D ++ V A ++++YN Y +V RA Q V G +YF + + + CTKS
Sbjct: 38 DLNDEWVQRALHFAISEYNKATKDDYYRRPLRVLRARQQTVGGVNYFFDVEVGRTICTKS 97
Query: 220 QAS--SCSLQSSDSV-PVGLCKGSLTRTHWE 247
Q + +C+ + LC + WE
Sbjct: 98 QPNLDTCAFHEQPELQKKQLCSFEIYEVPWE 128
Score = 32.7 bits (73), Expect = 0.56
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 3 LLLPLALCILVLCCGAMSPPQL-ALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGYV 61
LLL LA + L A SP + + P + + ND V FA+ + NK KD Y
Sbjct: 8 LLLLLATLAVAL---AWSPKEEDRIIPGGIYNADLNDEWVQRALHFAISEYNKATKDDYY 64
Query: 62 LRLNRVNDAQEYRRGGLGSLFYLTLDVLETDC 93
R RV A++ GG+ ++ ++V T C
Sbjct: 65 RRPLRVLRARQQTVGGVN--YFFDVEVGRTIC 94
>gi|196114970 protein tyrosine phosphatase, non-receptor type 12
isoform 3 [Homo sapiens]
Length = 650
Score = 32.7 bits (73), Expect = 0.56
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 266 SENSAVNQKPTNLPKV-----EESQQKNTPPTDSPSKAGPRGSVQY----------LPDL 310
S+NS V+ T KV EESQ +TPP +G V + +PDL
Sbjct: 361 SQNSCVDCSVTQSNKVSVTPPEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDL 420
Query: 311 DDKNSQEKGPQEAFPVHLDLTTNPQGETLDI 341
+ NS + Q V L + Q ET D+
Sbjct: 421 SEGNSSDINYQTRKTVSLTPSPTTQVETPDL 451
>gi|196114967 protein tyrosine phosphatase, non-receptor type 12
isoform 2 [Homo sapiens]
Length = 661
Score = 32.7 bits (73), Expect = 0.56
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 266 SENSAVNQKPTNLPKV-----EESQQKNTPPTDSPSKAGPRGSVQY----------LPDL 310
S+NS V+ T KV EESQ +TPP +G V + +PDL
Sbjct: 372 SQNSCVDCSVTQSNKVSVTPPEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDL 431
Query: 311 DDKNSQEKGPQEAFPVHLDLTTNPQGETLDI 341
+ NS + Q V L + Q ET D+
Sbjct: 432 SEGNSSDINYQTRKTVSLTPSPTTQVETPDL 462
>gi|196114951 protein tyrosine phosphatase, non-receptor type 12
isoform 1 [Homo sapiens]
Length = 780
Score = 32.7 bits (73), Expect = 0.56
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 15/91 (16%)
Query: 266 SENSAVNQKPTNLPKV-----EESQQKNTPPTDSPSKAGPRGSVQY----------LPDL 310
S+NS V+ T KV EESQ +TPP +G V + +PDL
Sbjct: 491 SQNSCVDCSVTQSNKVSVTPPEESQNSDTPPRPDRLPLDEKGHVTWSFHGPENAIPIPDL 550
Query: 311 DDKNSQEKGPQEAFPVHLDLTTNPQGETLDI 341
+ NS + Q V L + Q ET D+
Sbjct: 551 SEGNSSDINYQTRKTVSLTPSPTTQVETPDL 581
>gi|27436974 potassium voltage-gated channel, Shab-related
subfamily, member 2 [Homo sapiens]
Length = 911
Score = 32.7 bits (73), Expect = 0.56
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
Query: 247 EKFVSVTCDFFESQ-APATGSENSAVNQK-PTNLPKVEESQQKNTPPTDSPSK----AGP 300
+ F S DF E++ +P S + K PT+LP EE Q+ PP + S+ A
Sbjct: 604 DSFTSCATDFTETERSPLPPPSASHLQMKFPTDLPGTEEHQRARGPPFLTLSREKGPAAR 663
Query: 301 RGSVQYLPDLDDKNSQEKGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLVVLPFPK 360
G+++Y P N G Q +H L ++ ++ S P++ + + + F +
Sbjct: 664 DGTLEYAPVDITVNLDASGSQ--CGLHSPLQSDNATDSPKSSLKGSNPLKSRSLKVNFKE 721
Query: 361 EKARTAECPGPAQNASPL 378
+ + P P+
Sbjct: 722 NRGSAPQTPPSTARPLPV 739
>gi|4503107 cystatin C precursor [Homo sapiens]
Length = 146
Score = 32.3 bits (72), Expect = 0.73
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 159 PTDSSNHQ--VLEAATESLAKYNNENTSKQYS-LFKVTRASSQWVVGPSYFVEYLIKESP 215
P D+S + V A ++ +YN + +S +V RA Q V G +YF++ + +
Sbjct: 39 PMDASVEEEGVRRALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTT 98
Query: 216 CTKSQ 220
CTK+Q
Sbjct: 99 CTKTQ 103
>gi|4503109 cystatin S precursor [Homo sapiens]
Length = 141
Score = 32.3 bits (72), Expect = 0.73
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 161 DSSNHQVLEAATESLAKYNNENTSKQYSL-FKVTRASSQWVVGPSYFVEYLIKESPCTKS 219
D ++ V A ++++YN + Y +V RA Q G +YF + + + CTKS
Sbjct: 38 DLNDEWVQRALHFAISEYNKATEDEYYRRPLQVLRAREQTFGGVNYFFDVEVGRTICTKS 97
Query: 220 QAS--SCSLQSSDSV-PVGLCKGSLTRTHWEKFVSV 252
Q + +C+ + LC + WE +S+
Sbjct: 98 QPNLDTCAFHEQPELQKKQLCSFEIYEVPWEDRMSL 133
Score = 30.0 bits (66), Expect = 3.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 5 LPLALCILVLCCGAMSPPQLALNPSALLSRGCNDSDVLAVAGFALRDINKDRKDGYVLRL 64
L L + L + S + + P + ND V FA+ + NK +D Y R
Sbjct: 8 LLLLMATLAGALASSSKEENRIIPGGIYDADLNDEWVQRALHFAISEYNKATEDEYYRRP 67
Query: 65 NRVNDAQEYRRGGLGSLFYLTLDVLETDC 93
+V A+E GG+ ++ ++V T C
Sbjct: 68 LQVLRAREQTFGGVN--YFFDVEVGRTIC 94
>gi|122114651 ubiquitin specific peptidase 36 [Homo sapiens]
Length = 1123
Score = 32.0 bits (71), Expect = 0.95
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 264 TGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGPQ 321
+GS + ++Q PT++P + + K P PR + Q LP + NS G Q
Sbjct: 511 SGSPSPKLSQTPTHMPTILDDPGKKVKKPAPPQHFSPR-TAQGLPGTSNSNSSRSGSQ 567
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 31.6 bits (70), Expect = 1.2
Identities = 31/127 (24%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 204 SYFVEYLIKESPCTKSQASSCSLQSSDSVPVGLCKGSLTRTHWEKFVSVTCDFFESQAP- 262
S V + PCT S+ + + D VP L SL V+ + + P
Sbjct: 516 SKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSL--------VTASAKVLPTPQPL 567
Query: 263 ATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGPR--------GSVQYLP-DLDDK 313
S+ P +P E Q + T T SP K+ P+ +P DL K
Sbjct: 568 LPAPSGSSAPPHPAKMPSGTEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSK 627
Query: 314 NSQEKGP 320
++++K P
Sbjct: 628 SNRQKLP 634
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 264 TGSENSAVNQKPTNLPKVEES---QQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQEKGP 320
T S+NS V P P+ +E Q++ + K ++ D +++ GP
Sbjct: 269 TSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEEVDVTGP 328
Query: 321 QEAFPVHLDLTTNPQGETLDISFLFLE-PMEEKLVVL 356
+ P+ + P GETL F+E P EE ++
Sbjct: 329 IKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIV 365
>gi|54400758 DKFZP564O0823 protein [Homo sapiens]
Length = 310
Score = 31.2 bits (69), Expect = 1.6
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 220 QASSCSLQSSDSVPVGLCKGSLTRTHWEKFVSVTCDFFESQAPATGSENSAVNQKPTNLP 279
QA + S S + P + S+T H V+ T AP + +E S+ + PT+
Sbjct: 152 QAPASSPSSLSTSPPEVFSASVTTNH-SSTVTSTQPTGAPTAPESPTEESSSDHTPTSHA 210
Query: 280 KVEESQQKNTPPTDSPSK 297
E Q+ TPPT K
Sbjct: 211 TAEPVPQEKTPPTTVSGK 228
>gi|19882256 cystatin D precursor [Homo sapiens]
Length = 142
Score = 30.4 bits (67), Expect = 2.8
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 160 TDSSNHQVLEAATESLAKYNNE-NTSKQYSL-FKVTRASSQWVVGPSYFVEYLIKESPCT 217
TD ++ V A ++++YN N + YS +V A Q V G +Y+ + CT
Sbjct: 37 TDLNDKSVQCALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCT 96
Query: 218 KSQASSCSLQSSDSVPV---GLCKGSLTRTHWEKFVSV 252
KSQ + + +D + C + WE +S+
Sbjct: 97 KSQPNLDNCPFNDQPKLKEEEFCSFQINEVPWEDKISI 134
>gi|119964726 insulin-like growth factor 2 receptor precursor [Homo
sapiens]
Length = 2491
Score = 29.6 bits (65), Expect = 4.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 54 KDRKDGYVLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDC 104
+D G+V LN +N +Q Y G+G +F + C + K C
Sbjct: 937 RDPNSGFVFNLNPLNSSQGYNVSGIGKIFMFNVCGTMPVCGTILGKPASGC 987
>gi|4759336 Fanconi anemia, complementation group G [Homo sapiens]
Length = 622
Score = 29.6 bits (65), Expect = 4.7
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 64 LNRVNDAQEYRRGGLGSLFYLTLDVLETDCHVLRKKAWQDCGMRIFFESVYGQCKAIFYM 123
L +++ E R G L Y L V T H+L+ +AW G + S + +C + +
Sbjct: 428 LPKMSRLWEDARKGTKELPYCPLWVSAT--HLLQGQAWVQLGAQKVAISEFSRCLELLFR 485
Query: 124 NNPSRVLYLAAYNC 137
P AA+NC
Sbjct: 486 ATPEEKEQGAAFNC 499
>gi|188219599 N-myc and STAT interactor [Homo sapiens]
Length = 307
Score = 29.6 bits (65), Expect = 4.7
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 2/126 (1%)
Query: 155 PSSIPTDSSNHQVLEAATESLAKYNNENTSKQYSLFKVTRASSQWVVGPSYFVEYLIKES 214
P D N +++ T+ + E + L + T+ P +++L E+
Sbjct: 17 PDEFIKDEQNKGLIDEITKKNIQLKKEIQKLETELQEATKEFQIKEDIPETKMKFLSVET 76
Query: 215 PCTKSQAS--SCSLQSSDSVPVGLCKGSLTRTHWEKFVSVTCDFFESQAPATGSENSAVN 272
P SQ S SCS Q S VP + KG T ++ V+ N V
Sbjct: 77 PENDSQLSNISCSFQVSSKVPYEIQKGQALITFEKEEVAQNVVSMSKHHVQIKDVNLEVT 136
Query: 273 QKPTNL 278
KP L
Sbjct: 137 AKPVPL 142
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 29.6 bits (65), Expect = 4.7
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 258 ESQAPATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQE 317
ESQ P E+ A +P P+ E Q P SP +A + S LD +
Sbjct: 193 ESQVPKPPPESPAPPSRPLP-PQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKP 251
Query: 318 KGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLV 354
+ E + T PQ S LEP +V
Sbjct: 252 RKSSEPWSESSSPATTPQDGPSASSLWLLEPASYHVV 288
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 29.6 bits (65), Expect = 4.7
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 258 ESQAPATGSENSAVNQKPTNLPKVEESQQKNTPPTDSPSKAGPRGSVQYLPDLDDKNSQE 317
ESQ P E+ A +P P+ E Q P SP +A + S LD +
Sbjct: 278 ESQVPKPPPESPAPPSRPLP-PQTLEGLQPTGPEAGSPERAPVQNSPWKETSLDHPYEKP 336
Query: 318 KGPQEAFPVHLDLTTNPQGETLDISFLFLEPMEEKLV 354
+ E + T PQ S LEP +V
Sbjct: 337 RKSSEPWSESSSPATTPQDGPSASSLWLLEPASYHVV 373
>gi|4503113 cystatin M precursor [Homo sapiens]
Length = 149
Score = 29.3 bits (64), Expect = 6.2
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 166 QVLEAATESLAKYNNENTSKQYSL-FKVTRASSQWVVGPSYFVEYLIKESPCTKSQAS 222
QV +AA ++A YN + S Y + +A SQ V G YF+ + + C K++ +
Sbjct: 47 QVQKAAQAAVASYNMGSNSIYYFRDTHIIKAQSQLVAGIKYFLTMEMGSTDCRKTRVT 104
>gi|12751473 DNA cytosine methyltransferase 3 alpha isoform a [Homo
sapiens]
Length = 912
Score = 29.3 bits (64), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 258 ESQAPATGSENSAVNQKPTNLPKVEESQQKNTPP--TDSPSKAGPRGSVQYLPDLDDKNS 315
E Q P+T + + P VE P + SPS A G+ + LP+ D +
Sbjct: 37 ERQEPSTTARKVGRPGRKRKHPPVESGDTPKDPAVISKSPSMAQDSGASELLPNGDLEKR 96
Query: 316 QEKGPQEAFP 325
E P+E P
Sbjct: 97 SEPQPEEGSP 106
>gi|28559071 DNA cytosine methyltransferase 3 alpha isoform c [Homo
sapiens]
Length = 166
Score = 29.3 bits (64), Expect = 6.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 258 ESQAPATGSENSAVNQKPTNLPKVEESQQKNTPP--TDSPSKAGPRGSVQYLPDLDDKNS 315
E Q P+T + + P VE P + SPS A G+ + LP+ D +
Sbjct: 37 ERQEPSTTARKVGRPGRKRKHPPVESGDTPKDPAVISKSPSMAQDSGASELLPNGDLEKR 96
Query: 316 QEKGPQEAFP 325
E P+E P
Sbjct: 97 SEPQPEEGSP 106
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,146,135
Number of Sequences: 37866
Number of extensions: 772999
Number of successful extensions: 2878
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2847
Number of HSP's gapped (non-prelim): 50
length of query: 382
length of database: 18,247,518
effective HSP length: 104
effective length of query: 278
effective length of database: 14,309,454
effective search space: 3978028212
effective search space used: 3978028212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.