Guide to the Human Genome
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Name: FETUB Sequence: fasta or formatted (382aa) NCBI GI: 58331240
Description:

fetuin B

Referenced in:

Protein Glycosylation
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         26           2
 C cysteine            3.9         15           2
 D aspartate           5.0         19           2
 E glutamate           5.5         21           2
 F phenylalanine       3.7         14           2
 G glycine             5.0         19           2
 H histidine           1.0          4           1
 I isoleucine          2.1          8           1
 K lysine              6.3         24           3
 L leucine            11.3         43           3
 M methionine          1.6          6           1
 N asparagine          5.0         19           2
 P proline             8.1         31           2
 Q glutamine           4.7         18           2
 R arginine            3.9         15           2
 S serine              9.9         38           2
 T threonine           5.2         20           2
 V valine              6.8         26           2
 W tryptophan          0.8          3           1
 Y tyrosine            3.4         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fetuin B 
AHSG                  0.095   alpha-2-HS-glycoprotein 
HRG                   0.071   histidine-rich glycoprotein precursor 
KNG1                  0.054   kininogen 1 isoform 2 
KNG1                  0.054   kininogen 1 isoform 1 
CST7                  0.016   cystatin F 
CST2                  0.016   cystatin SA precursor 
HLF                   0.015   hepatic leukemia factor 
RAPGEF6               0.013   PDZ domain-containing guanine nucleotide exchange fa...
PVRL1                 0.012   poliovirus receptor-related 1 isoform 2 
CST1                  0.011   cystatin SN precursor 
PTPN12                0.011   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.011   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                0.011   protein tyrosine phosphatase, non-receptor type 12 ...
KCNB2                 0.011   potassium voltage-gated channel, Shab-related subfam...
CST3                  0.009   cystatin C precursor 
CST4                  0.009   cystatin S precursor 
USP36                 0.009   ubiquitin specific peptidase 36 
BCORL1                0.009   BCL6 co-repressor-like 1 
CHD8                  0.008   chromodomain helicase DNA binding protein 8 
DKFZP564O0823         0.008   DKFZP564O0823 protein 
CST5                  0.007   cystatin D precursor 
IGF2R                 0.007   insulin-like growth factor 2 receptor precursor [Ho...
FANCG                 0.007   Fanconi anemia, complementation group G 
NMI                   0.007   N-myc and STAT interactor 
C1orf106              0.007   hypothetical protein LOC55765 isoform 2 
C1orf106              0.007   hypothetical protein LOC55765 isoform 1 
CST6                  0.005   cystatin M precursor 
DNMT3A                0.005   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.005   DNA cytosine methyltransferase 3 alpha isoform c [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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