Guide to the Human Genome
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Name: NMI Sequence: fasta or formatted (307aa) NCBI GI: 188219599
Description:

N-myc and STAT interactor

Referenced in:

Interferon
Myc and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.9          9           1
 C cysteine            1.0          3           1
 D aspartate           6.2         19           2
 E glutamate          11.1         34           2
 F phenylalanine       3.6         11           1
 G glycine             4.9         15           3
 H histidine           2.3          7           2
 I isoleucine          8.1         25           1
 K lysine             10.4         32           3
 L leucine             6.5         20           2
 M methionine          2.3          7           1
 N asparagine          3.9         12           1
 P proline             3.3         10           1
 Q glutamine           6.8         21           2
 R arginine            2.9          9           1
 S serine              6.8         21           2
 T threonine           5.5         17           1
 V valine              8.8         27           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-myc and STAT interactor 
IFI35                 0.145   interferon-induced protein 35 
PARP14                0.033   poly (ADP-ribose) polymerase family, member 14 [Hom...
MYH6                  0.029   myosin heavy chain 6 
WDR44                 0.022   WD repeat domain 44 protein 
CCDC46                0.022   coiled-coil domain containing 46 isoform a 
EPS15                 0.021   epidermal growth factor receptor pathway substrate 15...
MYH15                 0.021   myosin, heavy polypeptide 15 
EPS15                 0.019   epidermal growth factor receptor pathway substrate ...
TPM2                  0.019   tropomyosin 2 (beta) isoform 2 
PDE4DIP               0.019   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.019   phosphodiesterase 4D interacting protein isoform 1 ...
WDR87                 0.019   NYD-SP11 protein 
PDE4DIP               0.019   phosphodiesterase 4D interacting protein isoform 4 [...
PDE4DIP               0.019   phosphodiesterase 4D interacting protein isoform 3 [...
FAM111B               0.019   hypothetical protein LOC374393 isoform b 
FAM111B               0.019   hypothetical protein LOC374393 isoform b 
FAM111B               0.019   hypothetical protein LOC374393 isoform a 
TPM2                  0.017   tropomyosin 2 (beta) isoform 1 
RAPGEF3               0.017   Rap guanine nucleotide exchange factor 3 isoform b ...
RAPGEF3               0.017   Rap guanine nucleotide exchange factor 3 isoform b [...
RAPGEF3               0.017   Rap guanine nucleotide exchange factor 3 isoform a ...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.017   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
C14orf145             0.017   hypothetical protein LOC145508 
GAS8                  0.016   growth arrest-specific 8 
GOLGA8B               0.014   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.014   golgi autoantigen, golgin subfamily a, 8A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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