Guide to the Human Genome
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Name: DNMT3A Sequence: fasta or formatted (166aa) NCBI GI: 28559071
Description:

DNA cytosine methyltransferase 3 alpha isoform c

Referenced in:

DNA Methylation

Other entries for this name:
alt prot [912aa] DNA cytosine methyltransferase 3 alpha isoform a
alt prot [912aa] DNA cytosine methyltransferase 3 alpha isoform a
alt prot [723aa] DNA cytosine methyltransferase 3 alpha isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         20           2
 C cysteine            1.2          2           2
 D aspartate           4.2          7           1
 E glutamate          14.5         24           2
 F phenylalanine       0.0          0           0
 G glycine            13.3         22           2
 H histidine           0.6          1           1
 I isoleucine          1.2          2           1
 K lysine              6.0         10           1
 L leucine             2.4          4           2
 M methionine          1.8          3           1
 N asparagine          1.2          2           1
 P proline            13.3         22           2
 Q glutamine           3.0          5           1
 R arginine            6.6         11           1
 S serine             12.0         20           3
 T threonine           4.2          7           2
 V valine              2.4          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA cytosine methyltransferase 3 alpha isoform c [Ho... 
DNMT3A                0.904   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.904   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
HCN4                  0.089   hyperpolarization activated cyclic nucleotide-gated p...
TERF2                 0.067   telomeric repeat binding factor 2 
OGFR                  0.064   opioid growth factor receptor 
BSN                   0.064   bassoon protein 
MAPT                  0.064   microtubule-associated protein tau isoform 1 
GTF2F1                0.064   general transcription factor IIF, polypeptide 1, 74...
BASP1                 0.064   brain abundant, membrane attached signal protein 1 [...
LOC100292262          0.064   PREDICTED: hypothetical protein 
C4orf8                0.064   hypothetical protein LOC8603 
HNRNPUL2              0.061   heterogeneous nuclear ribonucleoprotein U-like 2 [H...
MAPT                  0.061   microtubule-associated protein tau isoform 6 
NEFH                  0.061   neurofilament, heavy polypeptide 200kDa 
PDS5B                 0.054   PDS5, regulator of cohesion maintenance, homolog B [H...
BCAN                  0.054   brevican isoform 2 
BCAN                  0.054   brevican isoform 1 
GAP43                 0.054   growth associated protein 43 isoform 1 
GAP43                 0.054   growth associated protein 43 isoform 2 
COL5A1                0.054   alpha 1 type V collagen preproprotein 
ZNF335                0.054   zinc finger protein 335 
RPGR                  0.054   retinitis pigmentosa GTPase regulator isoform C [Hom...
DDN                   0.051   dendrin 
CHD7                  0.051   chromodomain helicase DNA binding protein 7 
MYLK2                 0.051   skeletal myosin light chain kinase 
SRRT                  0.048   arsenate resistance protein 2 isoform e 
SRRT                  0.048   arsenate resistance protein 2 isoform c 
RP1L1                 0.048   retinitis pigmentosa 1-like 1 
MAPK8IP2              0.048   mitogen-activated protein kinase 8 interacting protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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