Guide to the Human Genome
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Name: CST7 Sequence: fasta or formatted (167aa) NCBI GI: 20302139
Description:

cystatin F

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4          9           2
 C cysteine            4.8          8           2
 D aspartate           4.2          7           2
 E glutamate           4.2          7           1
 F phenylalanine       4.2          7           1
 G glycine             4.8          8           2
 H histidine           3.6          6           1
 I isoleucine          2.4          4           1
 K lysine              6.6         11           2
 L leucine            11.4         19           2
 M methionine          2.4          4           1
 N asparagine          4.2          7           2
 P proline             6.6         11           1
 Q glutamine           4.8          8           1
 R arginine            6.0         10           1
 S serine              4.8          8           1
 T threonine           9.0         15           2
 V valine              7.8         13           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cystatin F 
CST3                  0.160   cystatin C precursor 
CST1                  0.135   cystatin SN precursor 
CST4                  0.135   cystatin S precursor 
KNG1                  0.126   kininogen 1 isoform 2 
KNG1                  0.126   kininogen 1 isoform 1 
CST2                  0.126   cystatin SA precursor 
CST6                  0.126   cystatin M precursor 
CSTL1                 0.120   cystatin-like 1 precursor 
CST5                  0.104   cystatin D precursor 
CST8                  0.101   cystatin 8 precursor 
CST11                 0.061   cystatin 11 isoform 1 precursor 
CST9L                 0.058   cystatin 9-like precursor 
FETUB                 0.037   fetuin B 
SPP2                  0.025   secreted phosphoprotein 2, 24kDa precursor 
KCNMA1                0.018   large conductance calcium-activated potassium chann...
KCNMA1                0.018   large conductance calcium-activated potassium chann...
KCNMA1                0.018   large conductance calcium-activated potassium channe...
KCNMA1                0.018   large conductance calcium-activated potassium channe...
FAM185A               0.018   hypothetical protein LOC222234 isoform 1 
CCDC141               0.012   coiled-coil domain containing 141 
NKRF                  0.009   transcription factor NRF 
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.009   F-box and leucine-rich repeat protein 6 isoform 1 [H...
PTPRC                 0.006   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.006   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.006   protein tyrosine phosphatase, receptor type, C isofo...
NTN1                  0.006   netrin 1 
C15orf44              0.006   hypothetical protein LOC81556 isoform 1 
C15orf44              0.006   hypothetical protein LOC81556 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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