Guide to the Human Genome
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Name: IGF2R Sequence: fasta or formatted (2491aa) NCBI GI: 119964726
Description:

insulin-like growth factor 2 receptor precursor

Referenced in:

Fibronectin Family
Growth Hormone and Related Hormones
ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6        140           3
 C cysteine            4.9        122           2
 D aspartate           6.3        156           2
 E glutamate           5.9        146           3
 F phenylalanine       4.0        100           2
 G glycine             8.0        199           2
 H histidine           1.9         47           1
 I isoleucine          3.8         94           2
 K lysine              5.7        143           2
 L leucine             7.7        191           4
 M methionine          1.0         25           1
 N asparagine          4.1        103           2
 P proline             5.1        126           3
 Q glutamine           3.6         90           2
 R arginine            4.5        113           2
 S serine              9.0        224           3
 T threonine           6.9        172           3
 V valine              7.0        174           3
 W tryptophan          1.2         29           1
 Y tyrosine            3.9         97           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   insulin-like growth factor 2 receptor precursor [Ho... 
MMP2                  0.008   matrix metalloproteinase 2 isoform b 
MMP2                  0.008   matrix metalloproteinase 2 isoform a preproprotein [...
PLA2R1                0.008   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
PLA2R1                0.008   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
MMP9                  0.007   matrix metalloproteinase 9 preproprotein 
SEL1L                 0.007   sel-1 suppressor of lin-12-like 
HGFAC                 0.006   HGF activator preproprotein 
FN1                   0.006   fibronectin 1 isoform 3 preproprotein 
FN1                   0.006   fibronectin 1 isoform 1 preproprotein 
FN1                   0.006   fibronectin 1 isoform 4 preproprotein 
FN1                   0.006   fibronectin 1 isoform 5 preproprotein 
FN1                   0.006   fibronectin 1 isoform 2 preproprotein 
FN1                   0.006   fibronectin 1 isoform 6 preproprotein 
FN1                   0.006   fibronectin 1 isoform 7 preproprotein 
ELSPBP1               0.006   epididymal sperm binding protein 1 
M6PR                  0.005   cation-dependent mannose-6-phosphate receptor precurs...
LY75                  0.005   lymphocyte antigen 75 
MRC1                  0.005   mannose receptor C type 1 precursor 
MRC1L1                0.005   mannose receptor, C type 1-like 1 
F12                   0.005   coagulation factor XII precursor 
MRC2                  0.005   mannose receptor, C type 2 
RBM19                 0.003   RNA binding motif protein 19 
RBM19                 0.003   RNA binding motif protein 19 
RBM19                 0.003   RNA binding motif protein 19 
BSPH1                 0.003   bovine seminal plasma protein-like 1 
CNTNAP2               0.002   cell recognition molecule Caspr2 precursor 
SLC9A5                0.002   solute carrier family 9 (sodium/hydrogen exchanger), ...
NBPF20                0.002   hypothetical protein LOC400818 
CDC2L2                0.002   cell division cycle 2-like 2 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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