Guide to the Human Genome
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Name: FANCG Sequence: fasta or formatted (622aa) NCBI GI: 4759336
Description:

Fanconi anemia, complementation group G

Referenced in:

DNases, Recombination, and DNA Repair

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         65           3
 C cysteine            2.6         16           1
 D aspartate           4.8         30           1
 E glutamate           7.1         44           2
 F phenylalanine       2.1         13           1
 G glycine             5.6         35           1
 H histidine           1.6         10           1
 I isoleucine          1.6         10           2
 K lysine              3.2         20           1
 L leucine            19.5        121           5
 M methionine          0.8          5           1
 N asparagine          1.4          9           1
 P proline             5.8         36           3
 Q glutamine           7.1         44           2
 R arginine            6.3         39           2
 S serine              8.0         50           2
 T threonine           4.7         29           2
 V valine              3.9         24           1
 W tryptophan          2.1         13           2
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fanconi anemia, complementation group G 
TOMM70A               0.012   translocase of outer mitochondrial membrane 70 homol...
TTC14                 0.012   tetratricopeptide repeat domain 14 isoform a 
TTC14                 0.012   tetratricopeptide repeat domain 14 isoform b 
HTT                   0.010   huntingtin 
TTC28                 0.009   tetratricopeptide repeat domain 28 
LOC100292485          0.008   PREDICTED: hypothetical protein 
LOC100287491          0.008   PREDICTED: hypothetical protein 
LOC100287491          0.008   PREDICTED: hypothetical protein XP_002342841 
ACAD10                0.008   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.008   acyl-Coenzyme A dehydrogenase family, member 10 isof...
GFRA3                 0.007   GDNF family receptor alpha 3 preproprotein 
ZNF628                0.007   zinc finger protein 628 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.007   nuclear receptor co-repressor 2 isoform 1 
AGGF1                 0.007   angiogenic factor VG5Q 
KIF3B                 0.006   kinesin family member 3B 
RGAG1                 0.006   retrotransposon gag domain containing 1 
ANXA4                 0.006   annexin IV 
ERCC2                 0.005   excision repair cross-complementing rodent repair de...
ZNF180                0.005   zinc finger protein 180 
NKX6-1                0.005   NK6 transcription factor related, locus 1 
TMTC2                 0.005   transmembrane and tetratricopeptide repeat containin...
CHD8                  0.004   chromodomain helicase DNA binding protein 8 
PIAS2                 0.004   protein inhibitor of activated STAT X isoform alpha ...
PIAS2                 0.004   protein inhibitor of activated STAT X isoform beta [...
TTC29                 0.004   tetratricopeptide repeat domain 29 
FOXN1                 0.004   forkhead box N1 
CELSR2                0.004   cadherin EGF LAG seven-pass G-type receptor 2 
PLEKHO1               0.004   pleckstrin homology domain containing, family O memb...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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