Guide to the Human Genome
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Name: PTPN12 Sequence: fasta or formatted (650aa) NCBI GI: 196114970
Description:

protein tyrosine phosphatase, non-receptor type 12 isoform 3

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [780aa] protein tyrosine phosphatase, non-receptor type 12 isoform 1
alt prot [661aa] protein tyrosine phosphatase, non-receptor type 12 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         30           2
 C cysteine            2.3         15           1
 D aspartate           6.3         41           2
 E glutamate           9.1         59           2
 F phenylalanine       2.9         19           1
 G glycine             4.2         27           2
 H histidine           3.2         21           1
 I isoleucine          5.7         37           1
 K lysine              5.5         36           2
 L leucine             6.2         40           3
 M methionine          1.4          9           1
 N asparagine          4.9         32           1
 P proline             9.2         60           3
 Q glutamine           4.5         29           1
 R arginine            4.8         31           2
 S serine             10.3         67           2
 T threonine           7.1         46           2
 V valine              4.8         31           1
 W tryptophan          1.1          7           1
 Y tyrosine            2.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 12 ... 
PTPN12                1.000   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN12                1.000   protein tyrosine phosphatase, non-receptor type 12 ...
PTPN22                0.175   protein tyrosine phosphatase, non-receptor type 22 ...
PTPN22                0.175   protein tyrosine phosphatase, non-receptor type 22 ...
PTPN18                0.104   protein tyrosine phosphatase, non-receptor type 18 i...
PTPN18                0.092   protein tyrosine phosphatase, non-receptor type 18 ...
PTPN6                 0.069   protein tyrosine phosphatase, non-receptor type 6 is...
PTPRK                 0.066   protein tyrosine phosphatase, receptor type, K isof...
PTPRK                 0.066   protein tyrosine phosphatase, receptor type, K isofo...
PTPN6                 0.065   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.065   protein tyrosine phosphatase, non-receptor type 6 is...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform...
PTPRO                 0.064   receptor-type protein tyrosine phosphatase O isoform ...
PTPRT                 0.064   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.064   protein tyrosine phosphatase, receptor type, T isof...
PTPN4                 0.062   protein tyrosine phosphatase, non-receptor type 4 [Ho...
PTPRH                 0.062   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.062   protein tyrosine phosphatase, receptor type, H isof...
PTPRM                 0.060   protein tyrosine phosphatase, receptor type, M isof...
PTPRA                 0.060   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.060   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.060   protein tyrosine phosphatase, receptor type, A isofo...
PTPRM                 0.060   protein tyrosine phosphatase, receptor type, M isof...
PTPN9                 0.058   protein tyrosine phosphatase, non-receptor type 9 [Ho...
PTPN20B               0.058   protein tyrosine phosphatase, non-receptor type 20 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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