Search of human proteins with 55925612

Search of human proteins with 55925612

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|55925612 caspase recruitment domain family, member 17 [Homo
sapiens]
         (110 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|55925612 caspase recruitment domain family, member 17 [Homo s...   217   1e-57
gi|15431328 caspase 1 isoform alpha precursor [Homo sapiens]          169   3e-43
gi|16751833 caspase-1 dominant-negative inhibitor pseudo-ICE iso...   155   7e-39
gi|4502573 caspase 1 isoform beta precursor [Homo sapiens]            152   4e-38
gi|62953113 caspase-1 dominant-negative inhibitor pseudo-ICE iso...   146   3e-36
gi|10954343 ICEBERG caspase-1 inhibitor [Homo sapiens]                 93   4e-20
gi|40788015 caspase recruitment domain protein 12 [Homo sapiens]       41   2e-04
gi|15431334 caspase 1 isoform epsilon [Homo sapiens]                   39   7e-04
gi|7662404 caspase recruitment domain family, member 8 [Homo sap...    39   7e-04
gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens]            37   0.003
gi|15431330 caspase 1 isoform gamma precursor [Homo sapiens]           36   0.006
gi|15431332 caspase 1 isoform delta [Homo sapiens]                     36   0.006
gi|209870071 caspase 5 isoform b precursor [Homo sapiens]              35   0.017
gi|11545912 nucleotide-binding oligomerization domain containing...    33   0.038
gi|209870079 caspase 5 isoform f precursor [Homo sapiens]              33   0.049
gi|209870069 caspase 5 isoform a precursor [Homo sapiens]              33   0.049
gi|16554564 caspase recruitment domain family, member 6 [Homo sa...    32   0.11 
gi|4506537 receptor-interacting serine-threonine kinase 2 [Homo ...    31   0.19 
gi|54292123 lysosomal trafficking regulator [Homo sapiens]             30   0.54 
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]             29   0.93 
gi|109134344 SH3-domain binding protein 5 (BTK-associated) isofo...    29   0.93 
gi|109134336 SH3-domain binding protein 5 (BTK-associated) isofo...    29   0.93 
gi|5174617 nucleotide-binding oligomerization domain containing ...    28   1.6  
gi|154146187 TFIIS central domain-containing protein 1 [Homo sap...    27   2.7  
gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8...    27   4.6  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         27   4.6  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         27   4.6  
gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [...    27   4.6  
gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapi...    27   4.6  
gi|125625350 cell division cycle 25C isoform a [Homo sapiens]          27   4.6  

>gi|55925612 caspase recruitment domain family, member 17 [Homo
           sapiens]
          Length = 110

 Score =  217 bits (553), Expect = 1e-57
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
           MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS
Sbjct: 1   MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60

Query: 61  VIRKGAPACQICITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLPS 110
           VIRKGAPACQICITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLPS
Sbjct: 61  VIRKGAPACQICITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLPS 110


>gi|15431328 caspase 1 isoform alpha precursor [Homo sapiens]
          Length = 404

 Score =  169 bits (429), Expect = 3e-43
 Identities = 89/110 (80%), Positives = 97/110 (88%)

Query: 1   MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
           MADKVLKEKRK FIRS+GEGTINGLL ELL+TRVL++EE+E VK ENATVMDK RAL+DS
Sbjct: 1   MADKVLKEKRKLFIRSMGEGTINGLLDELLQTRVLNKEEMEKVKRENATVMDKTRALIDS 60

Query: 61  VIRKGAPACQICITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLPS 110
           VI KGA ACQICITYICEEDS+LAGTLGLSA  TSGN+L  QDSQ VL S
Sbjct: 61  VIPKGAQACQICITYICEEDSYLAGTLGLSADQTSGNYLNMQDSQGVLSS 110


>gi|16751833 caspase-1 dominant-negative inhibitor pseudo-ICE
          isoform 2 [Homo sapiens]
          Length = 97

 Score =  155 bits (392), Expect = 7e-39
 Identities = 80/97 (82%), Positives = 86/97 (88%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MADKVLKEKRK FI S+GEGTINGLL ELL+TRVL+QEE+E VK ENATVMDK RAL+DS
Sbjct: 1  MADKVLKEKRKLFIHSMGEGTINGLLDELLQTRVLNQEEMEKVKRENATVMDKTRALIDS 60

Query: 61 VIRKGAPACQICITYICEEDSHLAGTLGLSAGPTSGN 97
          VI KGA ACQICITYICEEDS+LA TLGLSAGP  GN
Sbjct: 61 VIPKGAQACQICITYICEEDSYLAETLGLSAGPIPGN 97


>gi|4502573 caspase 1 isoform beta precursor [Homo sapiens]
          Length = 383

 Score =  152 bits (385), Expect = 4e-38
 Identities = 78/93 (83%), Positives = 85/93 (91%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MADKVLKEKRK FIRS+GEGTINGLL ELL+TRVL++EE+E VK ENATVMDK RAL+DS
Sbjct: 1  MADKVLKEKRKLFIRSMGEGTINGLLDELLQTRVLNKEEMEKVKRENATVMDKTRALIDS 60

Query: 61 VIRKGAPACQICITYICEEDSHLAGTLGLSAGP 93
          VI KGA ACQICITYICEEDS+LAGTLGLSA P
Sbjct: 61 VIPKGAQACQICITYICEEDSYLAGTLGLSAAP 93


>gi|62953113 caspase-1 dominant-negative inhibitor pseudo-ICE
          isoform 1 [Homo sapiens]
          Length = 197

 Score =  146 bits (369), Expect = 3e-36
 Identities = 76/91 (83%), Positives = 82/91 (90%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MADKVLKEKRK FI S+GEGTINGLL ELL+TRVL+QEE+E VK ENATVMDK RAL+DS
Sbjct: 1  MADKVLKEKRKLFIHSMGEGTINGLLDELLQTRVLNQEEMEKVKRENATVMDKTRALIDS 60

Query: 61 VIRKGAPACQICITYICEEDSHLAGTLGLSA 91
          VI KGA ACQICITYICEEDS+LA TLGLSA
Sbjct: 61 VIPKGAQACQICITYICEEDSYLAETLGLSA 91


>gi|10954343 ICEBERG caspase-1 inhibitor [Homo sapiens]
          Length = 90

 Score = 93.2 bits (230), Expect = 4e-20
 Identities = 49/89 (55%), Positives = 63/89 (70%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MAD++L++KR+ FI SVG GTIN LL  LLE  V+SQE++  V+ EN TVMDKAR L+D 
Sbjct: 1  MADQLLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDENDTVMDKARVLIDL 60

Query: 61 VIRKGAPACQICITYICEEDSHLAGTLGL 89
          V  KG  +C   I ++CEED  LA  +GL
Sbjct: 61 VTGKGPKSCCKFIKHLCEEDPQLASKMGL 89


>gi|40788015 caspase recruitment domain protein 12 [Homo sapiens]
          Length = 1024

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 6  LKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDSVIRKG 65
          +K+  +  I+ +G   I  +  +L    VL++EE+ I+ CE     D AR ++  +++KG
Sbjct: 4  IKDNSRALIQRMGMTVIKQITDDLFVWNVLNREEVNIICCEKVE-QDAARGIIHMILKKG 62

Query: 66 APACQICITYICE 78
          + +C + +  + E
Sbjct: 63 SESCNLFLKSLKE 75


>gi|15431334 caspase 1 isoform epsilon [Homo sapiens]
          Length = 88

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 1  MADKVLKEKRKQFIRSVGEGTI---NGLLGELLETRVLSQEEIEIVKCENATVMDKAR 55
          MADKVLKEKRK FIRS+GE  +   +  +G +   R++   +     C+   +  K R
Sbjct: 1  MADKVLKEKRKLFIRSMGEDNVSWRHPTMGSVFIGRLIEHMQEYACSCDVEEIFRKVR 58


>gi|7662404 caspase recruitment domain family, member 8 [Homo
           sapiens]
          Length = 431

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 6   LKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDSVIRKG 65
           +KE  +Q    +G+  + G+L +L +  VL++ E E+V+ E  T   K  ALL  V +KG
Sbjct: 348 VKENHRQLQARMGD--LKGVLDDLQDNEVLTENEKELVEQEK-TRQSKNEALLSMVEKKG 404

Query: 66  APACQICITYICEEDSHLAGTL 87
             A  +    I E D +L   L
Sbjct: 405 DLALDVLFRSISERDPYLVSYL 426


>gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens]
          Length = 377

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 23/73 (31%), Positives = 40/73 (54%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MA+   ++K  + + S+G+  + G+L  L+E  VL+ +E E  K  +A   DK R + DS
Sbjct: 1  MAEGNHRKKPLKVLESLGKDFLTGVLDNLVEQNVLNWKEEEKKKYYDAKTEDKVRVMADS 60

Query: 61 VIRKGAPACQICI 73
          +  K   A Q+ +
Sbjct: 61 MQEKQRMAGQMLL 73


>gi|15431330 caspase 1 isoform gamma precursor [Homo sapiens]
          Length = 311

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 17/19 (89%), Positives = 18/19 (94%)

Query: 1  MADKVLKEKRKQFIRSVGE 19
          MADKVLKEKRK FIRS+GE
Sbjct: 1  MADKVLKEKRKLFIRSMGE 19


>gi|15431332 caspase 1 isoform delta [Homo sapiens]
          Length = 263

 Score = 36.2 bits (82), Expect = 0.006
 Identities = 17/19 (89%), Positives = 18/19 (94%)

Query: 1  MADKVLKEKRKQFIRSVGE 19
          MADKVLKEKRK FIRS+GE
Sbjct: 1  MADKVLKEKRKLFIRSMGE 19


>gi|209870071 caspase 5 isoform b precursor [Homo sapiens]
          Length = 376

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 4/96 (4%)

Query: 1  MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
          MA+   K+K  + +  +G+  ++G+   L +  VL+ +E E  K  +  + DKA  L+DS
Sbjct: 1  MAEDNHKKKTVKMLEYLGKDVLHGVFNYLAKHDVLTLKEEEKKKYYDTKIEDKALILVDS 60

Query: 61 VIRKGAPACQICITYICEEDSHLAGT---LGLSAGP 93
           +RK   A Q+    +   D  +      L + AGP
Sbjct: 61 -LRKNRVAHQMFTQTLLNMDQKITSVKPLLQIEAGP 95


>gi|11545912 nucleotide-binding oligomerization domain containing 2
           [Homo sapiens]
          Length = 1040

 Score = 33.5 bits (75), Expect = 0.038
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 2   ADKVLKEKRKQFIRSVGEGTING---LLGELLETRVLSQEEIEIVKCENATVMDKARALL 58
           + +  + +R Q +  +  G++ G   +L  LL   VLS E+ E        +   AR LL
Sbjct: 30  SQEAFQAQRSQLVELLVSGSLEGFESVLDWLLSWEVLSWEDYEGFHLLGQPLSHLARRLL 89

Query: 59  DSVIRKGAPACQ 70
           D+V  KG  ACQ
Sbjct: 90  DTVWNKGTWACQ 101


>gi|209870079 caspase 5 isoform f precursor [Homo sapiens]
          Length = 447

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 7   KEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDSVIRKGA 66
           K+K  + +  +G+  ++G+   L +  VL+ +E E  K  +  + DKA  L+DS +RK  
Sbjct: 78  KKKTVKMLEYLGKDVLHGVFNYLAKHDVLTLKEEEKKKYYDTKIEDKALILVDS-LRKNR 136

Query: 67  PACQICITYICEEDSHLAGT---LGLSAGP 93
            A Q+    +   D  +      L + AGP
Sbjct: 137 VAHQMFTQTLLNMDQKITSVKPLLQIEAGP 166


>gi|209870069 caspase 5 isoform a precursor [Homo sapiens]
          Length = 434

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 7   KEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDSVIRKGA 66
           K+K  + +  +G+  ++G+   L +  VL+ +E E  K  +  + DKA  L+DS +RK  
Sbjct: 65  KKKTVKMLEYLGKDVLHGVFNYLAKHDVLTLKEEEKKKYYDTKIEDKALILVDS-LRKNR 123

Query: 67  PACQICITYICEEDSHLAGT---LGLSAGP 93
            A Q+    +   D  +      L + AGP
Sbjct: 124 VAHQMFTQTLLNMDQKITSVKPLLQIEAGP 153


>gi|16554564 caspase recruitment domain family, member 6 [Homo
          sapiens]
          Length = 1037

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 4  KVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENAT-VMDKARALLDSVI 62
          ++++ +RK+ +  +     + +L  L   R++S+EE E +  EN T ++ K+R LL  V 
Sbjct: 9  EIIERERKKLLEILQHDP-DSILDTLTSRRLISEEEYETL--ENVTDLLKKSRKLLILVQ 65

Query: 63 RKGAPACQ 70
          +KG   CQ
Sbjct: 66 KKGEATCQ 73


>gi|4506537 receptor-interacting serine-threonine kinase 2 [Homo
           sapiens]
          Length = 540

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 1   MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
           +A + ++ KR+  +  + E  +N  L  LL   ++ +E+ E+V  +  T   K R LLD+
Sbjct: 435 IAQQWIQSKREDIVNQMTEACLNQSLDALLSRDLIMKEDYELVSTK-PTRTSKVRQLLDT 493

Query: 61  VIRKGAPACQICI 73
              +G    ++ +
Sbjct: 494 TDIQGEEFAKVIV 506


>gi|54292123 lysosomal trafficking regulator [Homo sapiens]
          Length = 3801

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 4    KVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATV 50
            K++++K K     + +GT+  LLG  L   +L+Q++ +   C+   V
Sbjct: 1298 KIIRQKEKNVFLLMQQGTVKNLLGGFLS--ILTQDDSDFQACQRVLV 1342


>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
          Length = 4624

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 13  FIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENA 48
           F  S+ E  +N L+  LL+  VLS+EE E +  EN+
Sbjct: 871 FKSSLVEEAVNELVNMLLDVEVLSEEESEKISNENS 906


>gi|109134344 SH3-domain binding protein 5 (BTK-associated) isoform
           b [Homo sapiens]
          Length = 298

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 72  CITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLP 109
           C  ++ E+DS        S+GPTS + +  Q   +V P
Sbjct: 150 CSNFVSEDDSETQSVSSFSSGPTSPSEMPDQFPAVVRP 187


>gi|109134336 SH3-domain binding protein 5 (BTK-associated) isoform
           a [Homo sapiens]
          Length = 455

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 72  CITYICEEDSHLAGTLGLSAGPTSGNHLTTQDSQIVLP 109
           C  ++ E+DS        S+GPTS + +  Q   +V P
Sbjct: 307 CSNFVSEDDSETQSVSSFSSGPTSPSEMPDQFPAVVRP 344


>gi|5174617 nucleotide-binding oligomerization domain containing 1
          [Homo sapiens]
          Length = 953

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 25 LLGELLETRVLSQEEIEIVKCENATVMDKARALLDSVIRKG 65
          L+  LL+    S E+ EIV C   T  DK R +LD V  KG
Sbjct: 40 LVDNLLKNDYFSAEDAEIV-CACPTQPDKVRKILDLVQSKG 79


>gi|154146187 TFIIS central domain-containing protein 1 [Homo
           sapiens]
          Length = 381

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 1   MADKVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKARALLDS 60
           MA+K LK+ R  +  S  +      + +  +T  +     E   C+  TV+D+    L S
Sbjct: 291 MANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCK-VTVIDRGTLFLPS 349

Query: 61  VIRKGAPACQICITYICEE 79
            +R   P  Q+    IC E
Sbjct: 350 WVRNSNPDEQMMTYVICNE 368


>gi|169162953 PREDICTED: RANBP2-like and GRIP domain containing 8
            [Homo sapiens]
          Length = 1765

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 7    KEKRKQFIRSVGEGT--INGLLGELLETRVLSQEEIEIVKCE 46
            KE+  Q +RS  +    +NGLL E+  T  +  E+I+++K E
Sbjct: 1651 KEELVQKLRSTTKSADHLNGLLREIEATNAVLMEQIKLLKSE 1692


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 4   KVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKAR 55
           K+++E++K         T + LLGEL E  V   +EI+ +K E      K R
Sbjct: 337 KIIEEEKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKER 388


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query: 4   KVLKEKRKQFIRSVGEGTINGLLGELLETRVLSQEEIEIVKCENATVMDKAR 55
           K+++E++K         T + LLGEL E  V   +EI+ +K E      K R
Sbjct: 337 KIIEEEKKTLELKDKLTTADKLLGELQEQIVQKNQEIKNMKLELTNSKQKER 388


>gi|83267877 RANBP2-like and GRIP domain containing 5 isoform 1 [Homo
            sapiens]
          Length = 1765

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 7    KEKRKQFIRSVGEGT--INGLLGELLETRVLSQEEIEIVKCE 46
            KE+  Q +RS  +    +NGLL E+  T  +  E+I+++K E
Sbjct: 1651 KEELVQKLRSTTKSADHLNGLLREIEATNAVLMEQIKLLKSE 1692


>gi|182765478 RANBP2-like and GRIP domain containing 6 [Homo sapiens]
          Length = 1765

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 7    KEKRKQFIRSVGEGT--INGLLGELLETRVLSQEEIEIVKCE 46
            KE+  Q +RS  +    +NGLL E+  T  +  E+I+++K E
Sbjct: 1651 KEELVQKLRSTTKSADHLNGLLREIEATNAVLMEQIKLLKSE 1692


>gi|125625350 cell division cycle 25C isoform a [Homo sapiens]
          Length = 473

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 17/83 (20%)

Query: 41  EIVKCENATVMDKARALLDS---------VIRKGAPACQICITYICEEDS---HLAGTLG 88
           ++ K ++ T+ DK +    S          ++K    C I IT + EEDS   HL G   
Sbjct: 228 QVEKFKDNTIPDKVKKKYFSGQGKLRKGLCLKKTVSLCDITITQMLEEDSNQGHLIGDFS 287

Query: 89  -LSAGPT-SGNHLTTQDSQIVLP 109
            + A PT SG H   QD + V P
Sbjct: 288 KVCALPTVSGKH---QDLKYVNP 307


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,073,194
Number of Sequences: 37866
Number of extensions: 154076
Number of successful extensions: 440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 418
Number of HSP's gapped (non-prelim): 33
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.