CASP1 28378

Name: CASP1	Sequence: fasta or formatted (383aa)		NCBI GI: 4502573
Description: caspase 1 isoform beta precursor		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Pyrin and Associated Functions
Other entries for this name: alt prot [404aa] caspase 1 isoform alpha precursor alt prot [311aa] caspase 1 isoform gamma precursor alt prot [263aa] caspase 1 isoform delta alt prot [88aa] caspase 1 isoform epsilon
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 24 2 C cysteine 3.1 12 1 D aspartate 5.7 22 2 E glutamate 8.1 31 2 F phenylalanine 4.2 16 1 G glycine 5.7 22 1 H histidine 2.1 8 1 I isoleucine 7.0 27 3 K lysine 7.0 27 2 L leucine 7.8 30 2 M methionine 3.7 14 1 N asparagine 3.7 14 1 P proline 4.4 17 1 Q glutamine 3.7 14 1 R arginine 5.2 20 2 S serine 7.6 29 2 T threonine 6.5 25 2 V valine 5.7 22 2 W tryptophan 0.8 3 1 Y tyrosine 1.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caspase 1 isoform beta precursor CASP1 0.983 caspase 1 isoform alpha precursor CASP1 0.766 caspase 1 isoform gamma precursor CASP1 0.605 caspase 1 isoform delta CASP4 0.459 caspase 4 isoform alpha precursor CASP5 0.424 caspase 5 isoform b precursor CASP5 0.423 caspase 5 isoform f precursor CASP5 0.423 caspase 5 isoform a precursor CASP4 0.418 caspase 4 isoform gamma precursor CASP5 0.399 caspase 5 isoform c CASP5 0.316 caspase 5 isoform d CARD16 0.273 caspase-1 dominant-negative inhibitor pseudo-ICE iso... CARD16 0.201 caspase-1 dominant-negative inhibitor pseudo-ICE iso... CARD17 0.170 caspase recruitment domain family, member 17 CASP1 0.170 caspase 1 isoform epsilon CASP2 0.114 caspase 2 isoform 1 preproprotein CARD18 0.096 ICEBERG caspase-1 inhibitor CASP9 0.078 caspase 9 isoform alpha preproprotein CASP3 0.074 caspase 3 preproprotein CASP3 0.074 caspase 3 preproprotein CASP14 0.074 caspase 14 precursor CASP10 0.070 caspase 10 isoform d preproprotein CASP10 0.070 caspase 10 isoform b preproprotein CASP10 0.068 caspase 10 isoform a preproprotein CASP7 0.059 caspase 7 isoform delta CASP7 0.059 caspase 7 isoform alpha CASP7 0.059 caspase 7 isoform alpha precursor CASP8 0.054 caspase 8 isoform G precursor CASP8 0.054 caspase 8 isoform B precursor CASP8 0.054 caspase 8 isoform C precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.