Guide to the Human Genome
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Name: SH3BP5 Sequence: fasta or formatted (455aa) NCBI GI: 109134336
Description:

SH3-domain binding protein 5 (BTK-associated) isoform a

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [298aa] SH3-domain binding protein 5 (BTK-associated) isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         40           2
 C cysteine            1.1          5           1
 D aspartate           5.9         27           2
 E glutamate          13.0         59           7
 F phenylalanine       2.2         10           1
 G glycine             5.9         27           2
 H histidine           0.7          3           1
 I isoleucine          2.9         13           2
 K lysine              7.3         33           2
 L leucine             7.7         35           2
 M methionine          3.1         14           2
 N asparagine          2.6         12           3
 P proline             4.6         21           2
 Q glutamine           5.5         25           1
 R arginine            7.0         32           3
 S serine             11.2         51           4
 T threonine           3.7         17           1
 V valine              5.1         23           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.3          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain binding protein 5 (BTK-associated) isofo... 
SH3BP5                0.651   SH3-domain binding protein 5 (BTK-associated) isofo...
SH3BP5L               0.217   SH3-binding domain protein 5-like 
MYH10                 0.044   myosin, heavy polypeptide 10, non-muscle 
TPM3                  0.037   tropomyosin 3 isoform 1 
MYH1                  0.036   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.035   myosin, heavy polypeptide 4, skeletal muscle 
SWAP70                0.035   SWAP-70 protein 
CCDC136               0.035   coiled-coil domain containing 136 
MYH2                  0.033   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.033   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.033   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH7B                 0.033   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH8                  0.033   myosin, heavy chain 8, skeletal muscle, perinatal [...
CEP110                0.033   centrosomal protein 110kDa 
MYH9                  0.031   myosin, heavy polypeptide 9, non-muscle 
MYH3                  0.031   myosin, heavy chain 3, skeletal muscle, embryonic [H...
TPM4                  0.031   tropomyosin 4 isoform 2 
MYH14                 0.031   myosin, heavy chain 14 isoform 1 
MYH14                 0.031   myosin, heavy chain 14 isoform 2 
MYH14                 0.031   myosin, heavy chain 14 isoform 3 
LOC400352             0.030   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.030   PREDICTED: similar to Putative golgin subfamily A m...
MSN                   0.030   moesin 
TPM1                  0.030   tropomyosin 1 alpha chain isoform 1 
MYH6                  0.030   myosin heavy chain 6 
GOLGA1                0.030   golgin 97 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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