NOD2 1558

Name: NOD2	Sequence: fasta or formatted (1040aa)		NCBI GI: 11545912
Description: nucleotide-binding oligomerization domain containing 2		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Pyrin and Associated Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.5 99 3 C cysteine 3.4 35 2 D aspartate 4.1 43 2 E glutamate 6.4 67 3 F phenylalanine 4.2 44 2 G glycine 6.9 72 2 H histidine 3.6 37 2 I isoleucine 2.5 26 1 K lysine 3.6 37 2 L leucine 16.9 176 3 M methionine 1.5 16 1 N asparagine 3.1 32 2 P proline 4.3 45 2 Q glutamine 5.3 55 2 R arginine 5.8 60 2 S serine 6.5 68 2 T threonine 4.0 42 3 V valine 5.1 53 2 W tryptophan 1.7 18 1 Y tyrosine 1.4 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleotide-binding oligomerization domain containing... NOD1 0.204 nucleotide-binding oligomerization domain containing ... NLRC3 0.090 NOD3 protein NLRP12 0.063 NLR family, pyrin domain containing 12 isoform 2 [Ho... NLRP3 0.058 NLR family, pyrin domain containing 3 isoform d [Ho... NLRP3 0.055 NLR family, pyrin domain containing 3 isoform a [Ho... NLRP3 0.055 NLR family, pyrin domain containing 3 isoform a [Hom... NLRP3 0.055 NLR family, pyrin domain containing 3 isoform c [Ho... NLRP3 0.055 NLR family, pyrin domain containing 3 isoform b [Hom... NLRC5 0.055 nucleotide-binding oligomerization domains 27 [Homo... NLRP14 0.050 NLR family, pyrin domain containing 14 CIITA 0.048 class II transactivator NLRP1 0.046 NLR family, pyrin domain containing 1 isoform 2 [Homo... NLRP1 0.046 NLR family, pyrin domain containing 1 isoform 4 [Hom... NLRP1 0.046 NLR family, pyrin domain containing 1 isoform 5 [Hom... NLRP1 0.046 NLR family, pyrin domain containing 1 isoform 3 [Hom... NLRP1 0.046 NLR family, pyrin domain containing 1 isoform 1 [Hom... NLRP7 0.044 NACHT, leucine rich repeat and PYD containing 7 isof... NLRP4 0.043 NLR family, pyrin domain containing 4 NLRP13 0.041 NACHT, leucine rich repeat and PYD containing 13 [H... NLRP6 0.040 NLR family, pyrin domain containing 6 NLRP9 0.038 NLR family, pyrin domain containing 9 NLRP10 0.038 NLR family, pyrin domain containing 10 NLRP2 0.036 NLR family, pyrin domain containing 2 NLRP7 0.033 NACHT, leucine rich repeat and PYD containing 7 iso... NLRP7 0.033 NACHT, leucine rich repeat and PYD containing 7 isof... NLRP5 0.032 NACHT, LRR and PYD containing protein 5 NLRX1 0.028 NLR family member X1 isoform 1 NLRX1 0.028 NLR family member X1 isoform 2 RNH1 0.027 ribonuclease/angiogenin inhibitor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.