Guide to the Human Genome
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Name: AKAP9 Sequence: fasta or formatted (3899aa) NCBI GI: 22538393
Description:

A-kinase anchor protein 9 isoform 3

Referenced in:

Centrosome
Cyclic Nucleotides
Partitioning and Organelles
ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [3907aa] A-kinase anchor protein 9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6        181           3
 C cysteine            1.0         40           2
 D aspartate           4.3        169           2
 E glutamate          15.3        598           3
 F phenylalanine       2.2         86           2
 G glycine             3.1        122           3
 H histidine           2.0         77           2
 I isoleucine          5.0        194           3
 K lysine              8.6        337           3
 L leucine            12.1        473           5
 M methionine          2.3         91           2
 N asparagine          3.9        154           2
 P proline             1.5         58           2
 Q glutamine           9.5        372           3
 R arginine            5.0        196           2
 S serine              7.8        304           3
 T threonine           5.1        197           3
 V valine              4.5        177           2
 W tryptophan          0.4         14           1
 Y tyrosine            1.5         59           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 9 isoform 3 
AKAP9                 0.999   A-kinase anchor protein 9 isoform 2 
PCNT                  0.038   pericentrin 
GOLGB1                0.038   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPF                 0.035   centromere protein F 
CENPE                 0.029   centromere protein E 
CEP290                0.028   centrosomal protein 290kDa 
GOLGA4                0.028   golgi autoantigen, golgin subfamily a, 4 
CEP250                0.025   centrosomal protein 2 
TCHH                  0.023   trichohyalin 
PLEC1                 0.022   plectin 1 isoform 11 
PLEC1                 0.022   plectin 1 isoform 10 
PLEC1                 0.022   plectin 1 isoform 8 
PLEC1                 0.022   plectin 1 isoform 7 
PLEC1                 0.022   plectin 1 isoform 6 
PLEC1                 0.022   plectin 1 isoform 3 
PLEC1                 0.022   plectin 1 isoform 2 
PLEC1                 0.022   plectin 1 isoform 1 
TPR                   0.021   nuclear pore complex-associated protein TPR 
TRIP11                0.021   thyroid hormone receptor interactor 11 
GCC2                  0.020   GRIP and coiled-coil domain-containing 2 
CROCC                 0.020   ciliary rootlet coiled-coil 
NUMA1                 0.020   nuclear mitotic apparatus protein 1 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 1 
CCDC88A               0.019   coiled-coil domain containing 88A isoform 2 
EEA1                  0.018   early endosome antigen 1, 162kD 
MYH10                 0.018   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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