Guide to the Human Genome
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Name: CASP5 Sequence: fasta or formatted (447aa) NCBI GI: 209870079
Description:

caspase 5 isoform f precursor

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Pyrin and Associated Functions

Other entries for this name:
alt prot [434aa] caspase 5 isoform a precursor
alt prot [376aa] caspase 5 isoform b precursor
alt prot [292aa] caspase 5 isoform c
alt prot [216aa] caspase 5 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         25           2
 C cysteine            2.7         12           3
 D aspartate           5.6         25           1
 E glutamate           6.5         29           3
 F phenylalanine       4.7         21           1
 G glycine             4.3         19           1
 H histidine           3.4         15           1
 I isoleucine          6.5         29           2
 K lysine             10.5         47           4
 L leucine            10.1         45           2
 M methionine          2.5         11           1
 N asparagine          4.7         21           2
 P proline             3.6         16           2
 Q glutamine           3.6         16           1
 R arginine            5.6         25           3
 S serine              6.3         28           2
 T threonine           5.4         24           1
 V valine              6.0         27           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caspase 5 isoform f precursor 
CASP5                 0.969   caspase 5 isoform a precursor 
CASP5                 0.838   caspase 5 isoform b precursor 
CASP5                 0.648   caspase 5 isoform c 
CASP4                 0.606   caspase 4 isoform alpha precursor 
CASP4                 0.537   caspase 4 isoform gamma precursor 
CASP5                 0.476   caspase 5 isoform d 
CASP1                 0.362   caspase 1 isoform beta precursor 
CASP1                 0.352   caspase 1 isoform alpha precursor 
CASP1                 0.341   caspase 1 isoform gamma precursor 
CASP1                 0.267   caspase 1 isoform delta 
CASP2                 0.084   caspase 2 isoform 1 preproprotein 
CASP1                 0.078   caspase 1 isoform epsilon 
CASP3                 0.066   caspase 3 preproprotein 
CASP3                 0.066   caspase 3 preproprotein 
CASP14                0.064   caspase 14 precursor 
CASP10                0.062   caspase 10 isoform a preproprotein 
CASP10                0.059   caspase 10 isoform b preproprotein 
CASP10                0.057   caspase 10 isoform d preproprotein 
CASP7                 0.057   caspase 7 isoform delta 
CASP7                 0.057   caspase 7 isoform alpha 
CASP7                 0.057   caspase 7 isoform alpha precursor 
CASP9                 0.056   caspase 9 isoform alpha preproprotein 
CASP6                 0.046   caspase 6 isoform alpha preproprotein 
CASP8                 0.039   caspase 8 isoform G precursor 
CASP8                 0.039   caspase 8 isoform B precursor 
CASP8                 0.035   caspase 8 isoform C precursor 
CASP8                 0.035   caspase 8 isoform C precursor 
CASP8                 0.035   caspase 8 isoform A precursor 
CASP6                 0.033   caspase 6 isoform beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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