CASP1 5551

Name: CASP1	Sequence: fasta or formatted (88aa)		NCBI GI: 15431334
Description: caspase 1 isoform epsilon		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Pyrin and Associated Functions
Other entries for this name: alt prot [404aa] caspase 1 isoform alpha precursor alt prot [311aa] caspase 1 isoform gamma precursor alt prot [263aa] caspase 1 isoform delta alt prot [383aa] caspase 1 isoform beta precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 3 1 C cysteine 3.4 3 1 D aspartate 4.5 4 1 E glutamate 9.1 8 2 F phenylalanine 8.0 7 1 G glycine 5.7 5 1 H histidine 3.4 3 1 I isoleucine 4.5 4 1 K lysine 5.7 5 1 L leucine 5.7 5 1 M methionine 5.7 5 1 N asparagine 1.1 1 1 P proline 4.5 4 1 Q glutamine 3.4 3 1 R arginine 10.2 9 1 S serine 5.7 5 1 T threonine 5.7 5 2 V valine 6.8 6 1 W tryptophan 1.1 1 1 Y tyrosine 2.3 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caspase 1 isoform epsilon CASP1 0.807 caspase 1 isoform delta CASP1 0.789 caspase 1 isoform gamma precursor CASP1 0.789 caspase 1 isoform alpha precursor CASP1 0.789 caspase 1 isoform beta precursor CASP5 0.422 caspase 5 isoform f precursor CASP5 0.422 caspase 5 isoform d CASP5 0.422 caspase 5 isoform c CASP5 0.422 caspase 5 isoform b precursor CASP5 0.422 caspase 5 isoform a precursor CASP4 0.404 caspase 4 isoform gamma precursor CASP4 0.404 caspase 4 isoform alpha precursor CARD17 0.087 caspase recruitment domain family, member 17 CARD16 0.087 caspase-1 dominant-negative inhibitor pseudo-ICE iso... CARD16 0.087 caspase-1 dominant-negative inhibitor pseudo-ICE iso... CASP2 0.043 caspase 2 isoform 1 preproprotein KAT5 0.025 K(lysine) acetyltransferase 5 isoform 1 KAT5 0.025 K(lysine) acetyltransferase 5 isoform 3 KAT5 0.025 K(lysine) acetyltransferase 5 isoform 2 CASP9 0.019 caspase 9 isoform beta preproprotein CASP9 0.019 caspase 9 isoform alpha preproprotein CASP7 0.019 caspase 7 isoform delta CASP7 0.019 caspase 7 isoform alpha CASP7 0.019 caspase 7 isoform alpha precursor CARD18 0.019 ICEBERG caspase-1 inhibitor TATDN2 0.012 TatD DNase domain containing 2 CASP3 0.006 caspase 3 preproprotein CASP3 0.006 caspase 3 preproprotein RTEL1 0.006 regulator of telomere elongation helicase 1 isoform ... RTEL1 0.006 regulator of telomere elongation helicase 1 isoform 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.