LYST 32515

Name: LYST	Sequence: fasta or formatted (3801aa)		NCBI GI: 54292123
Description: lysosomal trafficking regulator		Referenced in: Lysosomes and Related Organelles WD Repeat Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 218 2 C cysteine 2.4 93 3 D aspartate 4.6 174 2 E glutamate 7.1 268 6 F phenylalanine 3.9 148 2 G glycine 4.6 175 3 H histidine 3.3 124 3 I isoleucine 5.9 223 2 K lysine 5.6 214 2 L leucine 12.2 462 5 M methionine 2.0 77 2 N asparagine 4.4 166 3 P proline 4.3 163 2 Q glutamine 5.6 213 2 R arginine 4.5 172 3 S serine 9.5 362 3 T threonine 4.7 178 2 V valine 5.9 225 2 W tryptophan 1.2 44 2 Y tyrosine 2.7 102 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lysosomal trafficking regulator WDFY3 0.051 WD repeat and FYVE domain containing 3 isoform 1 [Ho... WDFY4 0.047 WDFY family member 4 NBEAL1 0.039 neurobeachin-like 1 isoform 3 NBEAL1 0.039 neurobeachin-like 1 isoform 1 NBEA 0.038 neurobeachin NBEAL1 0.037 neurobeachin-like 1 isoform 2 NBEAL2 0.035 neurobeachin-like 2 LRBA 0.032 LPS-responsive vesicle trafficking, beach and ancho... NSMAF 0.030 neutral sphingomyelinase (N-SMase) activation associ... NSMAF 0.030 neutral sphingomyelinase (N-SMase) activation assoc... WDR81 0.006 PREDICTED: WD repeat domain 81 WDR81 0.006 PREDICTED: WD repeat domain 81 WDR81 0.006 PREDICTED: WD repeat domain 81 PRPF19 0.005 PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom... TAF5 0.004 TBP-associated factor 5 WDR69 0.004 WD repeat domain 69 SPAG16 0.004 sperm associated antigen 16 isoform 1 GNB5 0.004 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.004 guanine nucleotide-binding protein, beta-5 subunit i... WDR38 0.004 WD repeat domain 38 FZR1 0.003 Fzr1 protein isoform 1 FZR1 0.003 Fzr1 protein isoform 3 FZR1 0.003 Fzr1 protein isoform 2 TEP1 0.003 telomerase-associated protein 1 WDR5B 0.003 WD repeat domain 5B KATNB1 0.003 katanin p80 subunit B 1 WDR48 0.003 WD repeat domain 48 WDR5 0.003 WD repeat domain 5 WDR5 0.003 WD repeat domain 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.