Guide to the Human Genome
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Name: SH3BP5 Sequence: fasta or formatted (298aa) NCBI GI: 109134344
Description:

SH3-domain binding protein 5 (BTK-associated) isoform b

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [455aa] SH3-domain binding protein 5 (BTK-associated) isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         23           2
 C cysteine            1.7          5           1
 D aspartate           5.0         15           2
 E glutamate           9.4         28           1
 F phenylalanine       2.3          7           1
 G glycine             7.7         23           2
 H histidine           1.0          3           1
 I isoleucine          2.7          8           2
 K lysine              7.4         22           2
 L leucine             7.0         21           1
 M methionine          4.0         12           2
 N asparagine          3.4         10           3
 P proline             5.4         16           1
 Q glutamine           4.4         13           1
 R arginine            5.7         17           3
 S serine             14.8         44           4
 T threonine           3.7         11           1
 V valine              5.0         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain binding protein 5 (BTK-associated) isofo... 
SH3BP5                1.000   SH3-domain binding protein 5 (BTK-associated) isofo...
SH3BP5L               0.141   SH3-binding domain protein 5-like 
SRRM2                 0.034   splicing coactivator subunit SRm300 
DSPP                  0.025   dentin sialophosphoprotein preproprotein 
TNRC18                0.023   trinucleotide repeat containing 18 
DCAF6                 0.021   IQ motif and WD repeats 1 isoform b 
AP3B1                 0.021   adaptor-related protein complex 3, beta 1 subunit [H...
ASXL3                 0.021   additional sex combs like 3 
DCAF6                 0.021   IQ motif and WD repeats 1 isoform a 
DAAM1                 0.018   dishevelled-associated activator of morphogenesis 1 ...
SLMAP                 0.018   sarcolemma associated protein 
LOC100133915          0.018   PREDICTED: hypothetical protein 
RAI1                  0.018   retinoic acid induced 1 
MCC                   0.016   mutated in colorectal cancers isoform 1 
CEP135                0.016   centrosome protein 4 
ARL6IP4               0.016   SRp25 nuclear protein isoform 3 
ZNF638                0.016   zinc finger protein 638 
ZNF638                0.016   zinc finger protein 638 
NAP1L3                0.016   nucleosome assembly protein 1-like 3 
SETD1A                0.016   SET domain containing 1A 
BAT2                  0.016   HLA-B associated transcript-2 
CDKN2AIP              0.016   CDKN2A interacting protein 
GBP4                  0.016   guanylate binding protein 4 
CNOT3                 0.016   CCR4-NOT transcription complex, subunit 3 
LOC643446             0.014   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.014   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.014   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.014   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.014   PREDICTED: similar to ribonucleic acid binding prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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