CASP1 5549

Name: CASP1	Sequence: fasta or formatted (311aa)		NCBI GI: 15431330
Description: caspase 1 isoform gamma precursor		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Pyrin and Associated Functions
Other entries for this name: alt prot [404aa] caspase 1 isoform alpha precursor alt prot [263aa] caspase 1 isoform delta alt prot [88aa] caspase 1 isoform epsilon alt prot [383aa] caspase 1 isoform beta precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 18 1 C cysteine 2.9 9 1 D aspartate 5.8 18 2 E glutamate 7.7 24 2 F phenylalanine 5.1 16 1 G glycine 5.5 17 1 H histidine 2.6 8 1 I isoleucine 6.8 21 3 K lysine 7.1 22 2 L leucine 6.8 21 2 M methionine 3.9 12 1 N asparagine 3.5 11 1 P proline 5.1 16 1 Q glutamine 3.5 11 1 R arginine 5.5 17 2 S serine 8.4 26 2 T threonine 6.1 19 2 V valine 5.8 18 2 W tryptophan 1.0 3 1 Y tyrosine 1.3 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 caspase 1 isoform gamma precursor CASP1 0.942 caspase 1 isoform beta precursor CASP1 0.942 caspase 1 isoform alpha precursor CASP1 0.802 caspase 1 isoform delta CASP4 0.514 caspase 4 isoform gamma precursor CASP4 0.514 caspase 4 isoform alpha precursor CASP5 0.491 caspase 5 isoform f precursor CASP5 0.491 caspase 5 isoform c CASP5 0.491 caspase 5 isoform b precursor CASP5 0.491 caspase 5 isoform a precursor CASP5 0.389 caspase 5 isoform d CASP1 0.209 caspase 1 isoform epsilon CASP2 0.140 caspase 2 isoform 1 preproprotein CASP3 0.091 caspase 3 preproprotein CASP3 0.091 caspase 3 preproprotein CASP14 0.091 caspase 14 precursor CASP9 0.086 caspase 9 isoform alpha preproprotein CASP10 0.086 caspase 10 isoform d preproprotein CASP10 0.086 caspase 10 isoform b preproprotein CASP10 0.084 caspase 10 isoform a preproprotein CASP7 0.072 caspase 7 isoform delta CASP7 0.072 caspase 7 isoform alpha CASP7 0.072 caspase 7 isoform alpha precursor CASP8 0.066 caspase 8 isoform G precursor CASP8 0.066 caspase 8 isoform B precursor CASP8 0.066 caspase 8 isoform C precursor CASP8 0.066 caspase 8 isoform C precursor CASP8 0.066 caspase 8 isoform A precursor CASP6 0.066 caspase 6 isoform alpha preproprotein CARD16 0.059 caspase-1 dominant-negative inhibitor pseudo-ICE iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.