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Search of human proteins with 54606888
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54606888 hypothetical protein LOC23251 [Homo sapiens]
(916 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54606888 hypothetical protein LOC23251 [Homo sapiens] 1860 0.0
gi|169168288 PREDICTED: hypothetical protein LOC100127206 [Homo ... 89 2e-17
gi|169168099 PREDICTED: hypothetical protein LOC100127206 [Homo ... 89 2e-17
gi|169167518 PREDICTED: hypothetical protein LOC100127206 [Homo ... 89 2e-17
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 40 0.013
gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 39 0.029
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 37 0.11
gi|68299795 chromodomain helicase DNA binding protein 1 [Homo sa... 36 0.19
gi|163310749 LIM and calponin homology domains 1 isoform e [Homo... 35 0.32
gi|163310747 LIM and calponin homology domains 1 isoform d [Homo... 35 0.32
gi|163310745 LIM and calponin homology domains 1 isoform c [Homo... 35 0.32
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 35 0.42
gi|162287219 prune homolog 2 [Homo sapiens] 34 0.55
gi|47578107 delangin isoform B [Homo sapiens] 34 0.71
gi|47578105 delangin isoform A [Homo sapiens] 34 0.71
gi|149193331 tripartite motif protein 15 [Homo sapiens] 33 0.93
gi|24158478 dapper 1 isoform 1 [Homo sapiens] 33 1.2
gi|4506537 receptor-interacting serine-threonine kinase 2 [Homo ... 33 1.6
gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens] 32 2.1
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 32 2.1
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 32 2.1
gi|33946327 nucleoporin 214kDa [Homo sapiens] 32 2.7
gi|83716024 kinesin family member 21B [Homo sapiens] 32 2.7
gi|160420295 hypothetical protein LOC85459 [Homo sapiens] 32 2.7
gi|31795546 solute carrier family 13 (sodium/sulfate symporters)... 32 3.5
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 32 3.5
gi|40549454 T-cell leukemia virus enhancer factor [Homo sapiens] 31 4.6
gi|51317366 myosin XVIIIB [Homo sapiens] 31 4.6
gi|22538426 TRAF3 interacting protein 2 isoform 1 [Homo sapiens] 31 4.6
gi|22538428 TRAF3 interacting protein 2 isoform 2 [Homo sapiens] 31 4.6
>gi|54606888 hypothetical protein LOC23251 [Homo sapiens]
Length = 916
Score = 1860 bits (4818), Expect = 0.0
Identities = 916/916 (100%), Positives = 916/916 (100%)
Query: 1 METSQETSLFLVKILEELDSKQNTVSYQDLCKSLCARFDLSQLAKLRSVLFYTACLDPNF 60
METSQETSLFLVKILEELDSKQNTVSYQDLCKSLCARFDLSQLAKLRSVLFYTACLDPNF
Sbjct: 1 METSQETSLFLVKILEELDSKQNTVSYQDLCKSLCARFDLSQLAKLRSVLFYTACLDPNF 60
Query: 61 PATLFKDKMKCTVNNQQSKKIMVAADIVTIFNLIQMNGGAAKEKLPTGRQKVRKKEASFE 120
PATLFKDKMKCTVNNQQSKKIMVAADIVTIFNLIQMNGGAAKEKLPTGRQKVRKKEASFE
Sbjct: 61 PATLFKDKMKCTVNNQQSKKIMVAADIVTIFNLIQMNGGAAKEKLPTGRQKVRKKEASFE 120
Query: 121 SCRSDTEICNAAECEPLNCELSERSFSRGYPIRQSSKCRKMDCKDCPQFVPASEPNFLLG 180
SCRSDTEICNAAECEPLNCELSERSFSRGYPIRQSSKCRKMDCKDCPQFVPASEPNFLLG
Sbjct: 121 SCRSDTEICNAAECEPLNCELSERSFSRGYPIRQSSKCRKMDCKDCPQFVPASEPNFLLG 180
Query: 181 VSKEVKNRAASLDRLQALAPYSVTSPQPCEMQRTYFPMNIENESISDQDSLPINQSIKET 240
VSKEVKNRAASLDRLQALAPYSVTSPQPCEMQRTYFPMNIENESISDQDSLPINQSIKET
Sbjct: 181 VSKEVKNRAASLDRLQALAPYSVTSPQPCEMQRTYFPMNIENESISDQDSLPINQSIKET 240
Query: 241 FISNEEPFVVQSCVQKRNIFKEDFHNLMAVSPSLVGPISKAENEHREPQSRKEPHKPPFF 300
FISNEEPFVVQSCVQKRNIFKEDFHNLMAVSPSLVGPISKAENEHREPQSRKEPHKPPFF
Sbjct: 241 FISNEEPFVVQSCVQKRNIFKEDFHNLMAVSPSLVGPISKAENEHREPQSRKEPHKPPFF 300
Query: 301 NHSFEMPYNSQYLNPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNK 360
NHSFEMPYNSQYLNPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNK
Sbjct: 301 NHSFEMPYNSQYLNPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNK 360
Query: 361 QTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ 420
QTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ
Sbjct: 361 QTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ 420
Query: 421 QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEH 480
QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEH
Sbjct: 421 QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEH 480
Query: 481 VLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSS 540
VLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSS
Sbjct: 481 VLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSS 540
Query: 541 CYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLV 600
CYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLV
Sbjct: 541 CYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLV 600
Query: 601 LRIGEIERKLESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSAS 660
LRIGEIERKLESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSAS
Sbjct: 601 LRIGEIERKLESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSAS 660
Query: 661 PRMFHAHSGSHGPKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATE 720
PRMFHAHSGSHGPKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATE
Sbjct: 661 PRMFHAHSGSHGPKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATE 720
Query: 721 SKIASISNSPRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQHRLP 780
SKIASISNSPRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQHRLP
Sbjct: 721 SKIASISNSPRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQHRLP 780
Query: 781 KQPKDGFLVEQVFSPHPYPASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAG 840
KQPKDGFLVEQVFSPHPYPASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAG
Sbjct: 781 KQPKDGFLVEQVFSPHPYPASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAG 840
Query: 841 DKGKLTALDLQTQESLNPNNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAA 900
DKGKLTALDLQTQESLNPNNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAA
Sbjct: 841 DKGKLTALDLQTQESLNPNNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAA 900
Query: 901 CTVILVIVVPICTMKS 916
CTVILVIVVPICTMKS
Sbjct: 901 CTVILVIVVPICTMKS 916
>gi|169168288 PREDICTED: hypothetical protein LOC100127206 [Homo
sapiens]
Length = 190
Score = 89.0 bits (219), Expect = 2e-17
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 799 PASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAGDKGKLTALDLQTQESLNP 858
P S+ + MK+NPLY D+ L E E ++ PSWTIEEY DK L +L NP
Sbjct: 81 PPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEY-----DKHSLHT-NLSGHLKENP 134
Query: 859 NNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAACTVILVIVVPICT 913
N+L +W+ D+YTPG+D+LLK++E + + +K C++ ++ ILV +V I T
Sbjct: 135 NDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS--ILVTIVTIIT 187
>gi|169168099 PREDICTED: hypothetical protein LOC100127206 [Homo
sapiens]
Length = 190
Score = 89.0 bits (219), Expect = 2e-17
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 799 PASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAGDKGKLTALDLQTQESLNP 858
P S+ + MK+NPLY D+ L E E ++ PSWTIEEY DK L +L NP
Sbjct: 81 PPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEY-----DKHSLHT-NLSGHLKENP 134
Query: 859 NNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAACTVILVIVVPICT 913
N+L +W+ D+YTPG+D+LLK++E + + +K C++ ++ ILV +V I T
Sbjct: 135 NDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS--ILVTIVTIIT 187
>gi|169167518 PREDICTED: hypothetical protein LOC100127206 [Homo
sapiens]
Length = 190
Score = 89.0 bits (219), Expect = 2e-17
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 799 PASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAGDKGKLTALDLQTQESLNP 858
P S+ + MK+NPLY D+ L E E ++ PSWTIEEY DK L +L NP
Sbjct: 81 PPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEY-----DKHSLHT-NLSGHLKENP 134
Query: 859 NNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAACTVILVIVVPICT 913
N+L +W+ D+YTPG+D+LLK++E + + +K C++ ++ ILV +V I T
Sbjct: 135 NDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS--ILVTIVTIIT 187
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 39.7 bits (91), Expect = 0.013
Identities = 74/342 (21%), Positives = 117/342 (34%), Gaps = 38/342 (11%)
Query: 437 SKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEHVLEPKKCRDLCTSGQG 496
S + SS D D S N + SSD+S + D +S
Sbjct: 674 SSDSSSSSDSSNSSDSSDSSDSS-NSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSS 732
Query: 497 KYSDRHTMKHSDDDSEIV----SDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLH 552
SD S D S+ S D SD D S S+ SS NS+ S +
Sbjct: 733 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSS--NSSDSNDSSN 790
Query: 553 KSDC----DSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLVLRIGEIER 608
SD +SS N + ++ +S D N ++++ S+ ++ +
Sbjct: 791 SSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS-------SDSSD 843
Query: 609 KLESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSASPRMFHAHS 668
+S G + S N D +S S SD S S + +
Sbjct: 844 SSDSSDGSDSDSSNRSDSSNSSDSS-------------DSSDSSNSSDSSDSSDSNESSN 890
Query: 669 GSHGPKLENNPDWCCSDASGSN--SESLRVKALKKSLFTRPSSRSLTEENSATESKIASI 726
S N+ D SD+S S+ S+S +S + +S S NS+ S +
Sbjct: 891 SSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDS 950
Query: 727 SNSPRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEAD 768
SNS + + + N + D+ D+ D S +D
Sbjct: 951 SNS-----SDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSD 987
>gi|163310743 LIM and calponin homology domains 1 isoform b [Homo
sapiens]
Length = 1057
Score = 38.5 bits (88), Expect = 0.029
Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 49/271 (18%)
Query: 383 FFNRNPSEEKLHYPNASSQ------------TPNF------PAPERRPTYLVPKDQQPIL 424
F ++ P +LH PN +SQ TP F P ERR ++Q+ +L
Sbjct: 729 FLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPQFKFWAWDPEEERRRQEKWQQEQERLL 788
Query: 425 PIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSI-----------NCTSGQLSSDTS- 472
Y +Q+ LK + + ++E+ E +++ I + ++ QLS+ +S
Sbjct: 789 QERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSTSSSM 848
Query: 473 SVGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISG 532
+ G+ T + ++ C+D K R DDS+++ R D + G
Sbjct: 849 TEGSGTMNKIDLGNCQD------EKQDRRWKKSFQGDDSDLLLKT-----RESDRLEEKG 897
Query: 533 S--TGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEE 590
S G + S + + + H+ D ++ H T S+ + + P HS E
Sbjct: 898 SLTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPT---HSSE 954
Query: 591 ELKTSVCKLVLRIGEIERKLESLSGVRDEIS 621
++K L I ++ES S R IS
Sbjct: 955 DVKPKTLPL---DKSINHQIESPSERRKSIS 982
>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
sapiens]
Length = 1083
Score = 36.6 bits (83), Expect = 0.11
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 46/249 (18%)
Query: 383 FFNRNPSEEKLHYPNASSQ------------TPNF------PAPERRPTYLVPKDQQPIL 424
F ++ P +LH PN +SQ TP F P ERR ++Q+ +L
Sbjct: 729 FLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPQFKFWAWDPEEERRRQEKWQQEQERLL 788
Query: 425 PIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSI-----------NCTSGQLSSDTS- 472
Y +Q+ LK + + ++E+ E +++ I + ++ QLS+ +S
Sbjct: 789 QERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSTSSSM 848
Query: 473 SVGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISG 532
+ G+ T + ++ C+D K R DDS+++ R D + G
Sbjct: 849 TEGSGTMNKIDLGNCQD------EKQDRRWKKSFQGDDSDLLLKT-----RESDRLEEKG 897
Query: 533 S--TGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEE 590
S G + S + + + H+ D ++ H T S+ + + P HS E
Sbjct: 898 SLTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPT---HSSE 954
Query: 591 ELKTSVCKL 599
++K L
Sbjct: 955 DVKPKTLPL 963
>gi|68299795 chromodomain helicase DNA binding protein 1 [Homo
sapiens]
Length = 1710
Score = 35.8 bits (81), Expect = 0.19
Identities = 59/265 (22%), Positives = 101/265 (38%), Gaps = 34/265 (12%)
Query: 506 HSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLT 565
HSD++S V + + + DD + +G SS +S GS SQ SD DS E
Sbjct: 4 HSDEES--VRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSE---- 57
Query: 566 KIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLVLRIGEIERKLESLSGVRDEISQVLG 625
G++ E+ + E K + E + S+ V + S +L
Sbjct: 58 ------------SGSQSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAV--QRSAILK 103
Query: 626 KLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSASPRMFHAHSGSHGPKLENNPDWCCSD 685
K + Q+ QQ + S ++ G +DS+S S K + DW
Sbjct: 104 K--QQQQQQQQQHQAS--------SNSGSEEDSSSSEDSDDSSSEVKRKKHKDEDW---Q 150
Query: 686 ASGSNSESLRVKALKKSLFTRPSSRSLTEENSATESKIASISNSPRDWRTITYTNRVGLN 745
SGS S S + SS TE + ++K+ S R ++ +G
Sbjct: 151 MSGSGSPSQSGSDSESEEEREKSSCDETESDYEPKNKVKSRKPQNRS-KSKNGKKILGQK 209
Query: 746 EEEIKDTGPGDNKDWHRKSKEADRQ 770
+ +I + D+++ + K + R+
Sbjct: 210 KRQIDSSEEDDDEEDYDNDKRSSRR 234
>gi|163310749 LIM and calponin homology domains 1 isoform e [Homo
sapiens]
Length = 890
Score = 35.0 bits (79), Expect = 0.32
Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 48/270 (17%)
Query: 383 FFNRNPSEEKLHYPNASSQTPN-----------------FPAPERRPTYLVPKDQQPILP 425
F ++ P +LH PN +SQ + P ERR ++Q+ +L
Sbjct: 563 FLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPFKFWAWDPEEERRRQEKWQQEQERLLQ 622
Query: 426 IAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSI-----------NCTSGQLSSDTS-S 473
Y +Q+ LK + + ++E+ E +++ I + ++ QLS+ +S +
Sbjct: 623 ERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSTSSSMT 682
Query: 474 VGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGS 533
G+ T + ++ C+D K R DDS+++ R D + GS
Sbjct: 683 EGSGTMNKIDLGNCQD------EKQDRRWKKSFQGDDSDLLLKT-----RESDRLEEKGS 731
Query: 534 --TGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEE 591
G + S + + + H+ D ++ H T S+ + + P HS E+
Sbjct: 732 LTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPT---HSSED 788
Query: 592 LKTSVCKLVLRIGEIERKLESLSGVRDEIS 621
+K L I ++ES S R IS
Sbjct: 789 VKPKTLPL---DKSINHQIESPSERRKSIS 815
>gi|163310747 LIM and calponin homology domains 1 isoform d [Homo
sapiens]
Length = 902
Score = 35.0 bits (79), Expect = 0.32
Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 48/270 (17%)
Query: 383 FFNRNPSEEKLHYPNASSQTPN-----------------FPAPERRPTYLVPKDQQPILP 425
F ++ P +LH PN +SQ + P ERR ++Q+ +L
Sbjct: 575 FLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPFKFWAWDPEEERRRQEKWQQEQERLLQ 634
Query: 426 IAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSI-----------NCTSGQLSSDTS-S 473
Y +Q+ LK + + ++E+ E +++ I + ++ QLS+ +S +
Sbjct: 635 ERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSTSSSMT 694
Query: 474 VGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGS 533
G+ T + ++ C+D K R DDS+++ R D + GS
Sbjct: 695 EGSGTMNKIDLGNCQD------EKQDRRWKKSFQGDDSDLLLKT-----RESDRLEEKGS 743
Query: 534 --TGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEE 591
G + S + + + H+ D ++ H T S+ + + P HS E+
Sbjct: 744 LTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPT---HSSED 800
Query: 592 LKTSVCKLVLRIGEIERKLESLSGVRDEIS 621
+K L I ++ES S R IS
Sbjct: 801 VKPKTLPL---DKSINHQIESPSERRKSIS 827
>gi|163310745 LIM and calponin homology domains 1 isoform c [Homo
sapiens]
Length = 1056
Score = 35.0 bits (79), Expect = 0.32
Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 48/270 (17%)
Query: 383 FFNRNPSEEKLHYPNASSQTPN-----------------FPAPERRPTYLVPKDQQPILP 425
F ++ P +LH PN +SQ + P ERR ++Q+ +L
Sbjct: 729 FLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPFKFWAWDPEEERRRQEKWQQEQERLLQ 788
Query: 426 IAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSI-----------NCTSGQLSSDTS-S 473
Y +Q+ LK + + ++E+ E +++ I + ++ QLS+ +S +
Sbjct: 789 ERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSADQLSTSSSMT 848
Query: 474 VGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGS 533
G+ T + ++ C+D K R DDS+++ R D + GS
Sbjct: 849 EGSGTMNKIDLGNCQD------EKQDRRWKKSFQGDDSDLLLKT-----RESDRLEEKGS 897
Query: 534 --TGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEE 591
G + S + + + H+ D ++ H T S+ + + P HS E+
Sbjct: 898 LTEGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPT---HSSED 954
Query: 592 LKTSVCKLVLRIGEIERKLESLSGVRDEIS 621
+K L I ++ES S R IS
Sbjct: 955 VKPKTLPL---DKSINHQIESPSERRKSIS 981
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 34.7 bits (78), Expect = 0.42
Identities = 60/280 (21%), Positives = 102/280 (36%), Gaps = 26/280 (9%)
Query: 321 PDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNKQTPWPAKSWSLNTEEVP--- 377
P K + H S D + S+ P T+E R +P K + + S L E+
Sbjct: 172 PKKTKPSHGSKDANKESSKTSK-PHKVTKEHRE---RPRKDSESKSSSKELEREQAKSSK 227
Query: 378 DFERSFFN-RNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQQPILPIAYAAKQNGLK 436
D R R P EEK P A+ + P E + PK P P +
Sbjct: 228 DTSRKLGEGRLPKEEKAPPPKAAFKEPKMALKETKLESTSPKGGPPPPPPPPPRASS--- 284
Query: 437 SKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEHVLEPKK-CRDLCTSGQ 495
P + +P K + KS + G S+ +S T + KK +D ++
Sbjct: 285 ----KRPATADSPKPSAKKQKKS--SSKGSRSAPGTSPRTSSSSSFSDKKPAKDKSSTRG 338
Query: 496 GKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSD 555
K + + E+ + D F + + QSS NS+ S SD
Sbjct: 339 EKVKAESEPREAKKALEVEESNSEDEASFKSESA--------QSSPSNSSSSSDSSSDSD 390
Query: 556 CDSSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTS 595
+ S H+ + + V + + ++ + +++ E KT+
Sbjct: 391 FEPSQNHSQGPLRSMVEDLQSEESDEDDSSSGEEAAGKTN 430
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 34.3 bits (77), Expect = 0.55
Identities = 55/278 (19%), Positives = 110/278 (39%), Gaps = 40/278 (14%)
Query: 417 PKDQQPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGT 476
P+ ++P + Y L S+++ + + + +P + ++ + +++TS
Sbjct: 1392 PQTEEPEEVLEYEEGSYNLDSRDVQTGMSADNLQPKDTHEKHLMSQRNSGETTETSDGMN 1451
Query: 477 QTEHVLEPKK-------CRDLCTSGQGKYSDRHTMKHSDD------DSEI-VSDDISDIF 522
T++V P+K C L G H + S D DS++ VS S+I
Sbjct: 1452 FTKYVSVPEKDLEKTEECNFLEPENVGG-GPPHRVPRSLDFGDVPIDSDVHVSSTCSEIT 1510
Query: 523 RFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKGDKGNRP 582
+ LD S SS ++S + SSPE N + +A + G +
Sbjct: 1511 KNLDVKGSENSLPGAGSSGNFDRDTISSEYTHSSASSPELNDSSVALSSWGQQPSSGYQE 1570
Query: 583 EN------THHSEEELKTS--VCKLVLRIGEIERKLESLSGVRDEISQVLGKLNKLDQKM 634
EN +H E EL T+ ++V ++ ++E+ ++N+ ++
Sbjct: 1571 ENQGNWSEQNHQESELITTDGQVEIVTKVKDLEK----------------NRINEFEKSF 1614
Query: 635 QQPEKVSVQIDLNSLTSEGPSD-DSASPRMFHAHSGSH 671
+ ++I +S+ + S S + HSG+H
Sbjct: 1615 DRKTPTFLEIWNDSVDGDSFSSLSSPETGKYSEHSGTH 1652
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 33.9 bits (76), Expect = 0.71
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 673 PKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATESKIASISNS--- 729
PK +++P+ S+ S S K + L SS + E T+++ + S
Sbjct: 600 PKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRTT 659
Query: 730 --PRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQH-----RLPKQ 782
++ TI + NE + DT P DNK + +S+ + + P Q PKQ
Sbjct: 660 ECKQNESTIVEPKQ---NENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQ 716
Query: 783 PKDG 786
DG
Sbjct: 717 KSDG 720
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 33.9 bits (76), Expect = 0.71
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 673 PKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATESKIASISNS--- 729
PK +++P+ S+ S S K + L SS + E T+++ + S
Sbjct: 600 PKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRTT 659
Query: 730 --PRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQH-----RLPKQ 782
++ TI + NE + DT P DNK + +S+ + + P Q PKQ
Sbjct: 660 ECKQNESTIVEPKQ---NENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPKQ 716
Query: 783 PKDG 786
DG
Sbjct: 717 KSDG 720
>gi|149193331 tripartite motif protein 15 [Homo sapiens]
Length = 465
Score = 33.5 bits (75), Expect = 0.93
Identities = 16/60 (26%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 589 EEELKTSVCKLVLRIGEIERKL-----ESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQ 643
++EL+ C L+ R+ E+E+++ E ++ V +E++++ ++ +L++K QQP +Q
Sbjct: 177 QQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQ 236
>gi|24158478 dapper 1 isoform 1 [Homo sapiens]
Length = 836
Score = 33.1 bits (74), Expect = 1.2
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 505 KHSDDDSEIVSDDISDIFRFLDDMS--ISGSTGVIQSSCYNSTGSLSQLHKSDCDSSPEH 562
K S++ E S S + D S +S S+ + S C LS H S C SP
Sbjct: 145 KTSEEHLETDSRPSSGFYELSDGASGSLSNSSNSVFSEC------LSSCHSSTCFCSPLE 198
Query: 563 NLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCK 598
+++G P S G H E++ +VC+
Sbjct: 199 ATLSLSDGCPKSADLIGLLEYKEGHCEDQASGAVCR 234
>gi|4506537 receptor-interacting serine-threonine kinase 2 [Homo
sapiens]
Length = 540
Score = 32.7 bits (73), Expect = 1.6
Identities = 17/78 (21%), Positives = 35/78 (44%)
Query: 593 KTSVCKLVLRIGEIERKLESLSGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSE 652
+ S K ++ + + R E ++ + I KL + + +K +++ LN +
Sbjct: 280 RPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSVSSAIHLCDKKKMELSLNIPVNH 339
Query: 653 GPSDDSASPRMFHAHSGS 670
GP ++S H +SGS
Sbjct: 340 GPQEESCGSSQLHENSGS 357
>gi|10863903 thyroid hormone receptor interactor 12 [Homo sapiens]
Length = 1992
Score = 32.3 bits (72), Expect = 2.1
Identities = 53/242 (21%), Positives = 84/242 (34%), Gaps = 44/242 (18%)
Query: 650 TSEGPSDDSASPRMFHAHSGSHGPKLENNPDWCCSDASGSNSESLRVKALKKSLFTRPSS 709
+++ PS A R A GS K + C SGS S ++ K + S+
Sbjct: 124 SAQSPSTSKAHTRKSGATGGSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSA 183
Query: 710 RS-------LTEENSA-----TESKIASIS---------------NSPRDWRTITYTN-R 741
S +T+ +SA + S +AS S N R R+ + + R
Sbjct: 184 TSAKAGCSTITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPR 243
Query: 742 VGLNEEEIKDTGPGDNKDWHRKSKEADRQYDIPPQHRLPKQPKDGFLVEQVFSPHPYPAS 801
E+E TG DW + P+ LPK + + P P+
Sbjct: 244 RSSREKEQSKTGGSSKFDWAAR---------FSPKVSLPKTKLSLPGSSKSETSKPGPSG 294
Query: 802 LKAHMKSNPLYTDMR-------LTELAEVKRGQPSWTIEEYARNAGDKGKLTALDLQTQE 854
L+A + S T R L L R + + + +R GK A + + QE
Sbjct: 295 LQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQE 354
Query: 855 SL 856
+
Sbjct: 355 KM 356
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 32.3 bits (72), Expect = 2.1
Identities = 54/252 (21%), Positives = 94/252 (37%), Gaps = 42/252 (16%)
Query: 199 APYSVTSPQPCEMQRTYFPMNIENESISDQDSLPINQSIKETFISNEEPFVVQSCVQKRN 258
+P + +SP P + + Y ++ Q+S+ S + + EEP R
Sbjct: 306 SPIAPSSPSPQVLAQKY-------SLVAKQESVVRRASRRLAKKTAEEP-----AASGRI 353
Query: 259 IFKEDFHNLMAVS-PSLVGPISKAENEHREPQSRKEPHKPPFFNHSFEMPYN-SQYLNPV 316
I L+ V P VG K E EP + EP P N + P+N ++ N
Sbjct: 354 ICHSYLERLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPE-NNGNNSWPHNDTEIANST 412
Query: 317 YSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNKQTPWPAKSWSLNTEEV 376
+P P + TP G QEA+ ++ P A+ + V
Sbjct: 413 PNPKPAASSPE---------------TPSAGQQEAKTDQADGPREPPQSARRKRSYKQAV 457
Query: 377 PDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQQPILPIAYAAKQNGLK 436
+ + ++ +E+L P S+TP+ P P K +P+ + ++N +
Sbjct: 458 SELDE---EQHLEDEELQPPR--SKTPSSPCP-------ASKVVRPLRTFLHTVQRNQML 505
Query: 437 SKEISSPVDLEK 448
S+P + K
Sbjct: 506 MTPTSAPRSVMK 517
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 32.3 bits (72), Expect = 2.1
Identities = 54/252 (21%), Positives = 94/252 (37%), Gaps = 42/252 (16%)
Query: 199 APYSVTSPQPCEMQRTYFPMNIENESISDQDSLPINQSIKETFISNEEPFVVQSCVQKRN 258
+P + +SP P + + Y ++ Q+S+ S + + EEP R
Sbjct: 306 SPIAPSSPSPQVLAQKY-------SLVAKQESVVRRASRRLAKKTAEEP-----AASGRI 353
Query: 259 IFKEDFHNLMAVS-PSLVGPISKAENEHREPQSRKEPHKPPFFNHSFEMPYN-SQYLNPV 316
I L+ V P VG K E EP + EP P N + P+N ++ N
Sbjct: 354 ICHSYLERLLNVEVPQKVGSEQKEPPEEAEPVAAAEPEVPE-NNGNNSWPHNDTEIANST 412
Query: 317 YSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQEARRCLGKPNKQTPWPAKSWSLNTEEV 376
+P P + TP G QEA+ ++ P A+ + V
Sbjct: 413 PNPKPAASSPE---------------TPSAGQQEAKTDQADGPREPPQSARRKRSYKQAV 457
Query: 377 PDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQQPILPIAYAAKQNGLK 436
+ + ++ +E+L P S+TP+ P P K +P+ + ++N +
Sbjct: 458 SELDE---EQHLEDEELQPPR--SKTPSSPCP-------ASKVVRPLRTFLHTVQRNQML 505
Query: 437 SKEISSPVDLEK 448
S+P + K
Sbjct: 506 MTPTSAPRSVMK 517
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 32.0 bits (71), Expect = 2.7
Identities = 68/276 (24%), Positives = 106/276 (38%), Gaps = 43/276 (15%)
Query: 396 PNASSQTPNFPAPERRPTYLVPKDQQPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKF 455
P+ ++P P +P K QP + A++ G + K+ S PV E + F
Sbjct: 660 PSMVQKSPRITPPAAKPGSPQAKSLQPAV-----AEKQGHQWKD-SDPVMAGIGEEIAHF 713
Query: 456 KDKSINCTSGQLSSDTSSVGTQTEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVS 515
+ K + + S VGT E + + DL T + + +E +
Sbjct: 714 Q-KELEELKARTSKACFQVGTSEEMKMLRTESDDLHTF----------LLEIKETTESLH 762
Query: 516 DDISDIFRFLDDMSISGSTGVIQSSCYNS----TGSLSQLHKSDCDSSPE---------H 562
DIS + L + G GV ++ N +G L L+K D E H
Sbjct: 763 GDISSLKTTL----LEGFAGVEEAREQNERNRDSGYLHLLYKRPLDPKSEAQLQEIRRLH 818
Query: 563 NLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLVLRIGEIERKLESLSGVRDEISQ 622
K A N D E H E++ K + L + E E +L+ R+ I+Q
Sbjct: 819 QYVKFAVQDVNDVLDL----EWDQHLEQKKK----QRHLLVPERETLFNTLANNREIINQ 870
Query: 623 VLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDS 658
+LN L +QQ ++ Q L SL+S PS S
Sbjct: 871 QRKRLNHLVDSLQQ-LRLYKQTSLWSLSSAVPSQSS 905
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 32.0 bits (71), Expect = 2.7
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 679 PDWCCSDASGSNSESLRVKALKKSLFTRPSSRSLTEENSATESKIASISNSPRDWRTITY 738
P C S A G L + A + LFT RS N T +IA++ P + +I Y
Sbjct: 1284 PLQCVSMAEGHTKPILCLDATDELLFTGSKDRSCKMWNLVTGQEIAALKGHPNNVVSIKY 1343
Query: 739 TNRVGL 744
+ GL
Sbjct: 1344 CSHSGL 1349
>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
Length = 2601
Score = 32.0 bits (71), Expect = 2.7
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 420 QQPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKK--FKDKSINCTSGQLSSDTSSVGTQ 477
Q+ +L + A++ L ++ + ++KHE K FKD I+ + + T +G
Sbjct: 1717 QREVLHYSQKAQEKLLVQRQTALQQQIQKHEETLKDFFKDSQISKPTVENDLKTQKMGQL 1776
Query: 478 TEHVLEPKKCRDLCTSGQGKYSDRHTMKHSDDDSEIVSDDIS 519
+ +DL +G + + RH +++ DD+ + S+D S
Sbjct: 1777 RDWF---PNTQDL--AGNDQENIRHADRNNSDDNHLASEDTS 1813
>gi|31795546 solute carrier family 13 (sodium/sulfate symporters),
member 4 [Homo sapiens]
Length = 626
Score = 31.6 bits (70), Expect = 3.5
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 7/136 (5%)
Query: 228 QDSLPINQSIKETFISNEEPFVVQSCVQKRNIFKEDFHNLMAVSPSLVGPISKAENEHRE 287
+++ PI+ +K + S E FV + + NL V PS+ PI K N+H+
Sbjct: 174 EEAEPISLDVKNSQPSLELIFVNEESNADLTTLMHN-ENLNGV-PSITNPI-KTANQHQG 230
Query: 288 PQSRKEPHKPPFFNHSFEMPYNSQYLNPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMG 347
+ KP S Q LN Y D+ K SL ++T G T ++G
Sbjct: 231 KKQHPSQEKPQVLTPS----PRKQKLNRKYRSHHDQMICKCLSLSISYSATIGGLTTIIG 286
Query: 348 TQEARRCLGKPNKQTP 363
T + L N Q P
Sbjct: 287 TSTSLIFLEHFNNQYP 302
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 31.6 bits (70), Expect = 3.5
Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 51/260 (19%)
Query: 428 YAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEHVLEPKKC 487
Y + N LK KE + DL K K+ I +L ++ Q +HV+E K+
Sbjct: 1055 YKDENNRLKEKEHKNQDDLLKE------KETLIQQLKEELQEKNVTLDVQIQHVVEGKRA 1108
Query: 488 RDLCTSGQGKYSDR--------HTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQS 539
T G Y + T K S + DI + + + + + Q
Sbjct: 1109 LSELTQGVTCYKAKIKELETILETQKVECSHSAKLEQDILEKESII--LKLERNLKEFQE 1166
Query: 540 SCYNSTGSLSQLHKSDCDSSPEHNLTKIANGVPNSKG--------DKGNRPENTHHSEEE 591
+S + L+ + E +T++ N + + K ++ NR E T +EE
Sbjct: 1167 HLQDSVKNTKDLNVKELKLKEE--ITQLTNNLQDMKHLLQLKEEEEETNRQE-TEKLKEE 1223
Query: 592 LKTSVCKLVLRIGEIERKLES---------------------LSGVRDEISQVLGKLNKL 630
L S + +++RK E +S +RDE + K+N+L
Sbjct: 1224 LSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDEDKLLRIKINEL 1283
Query: 631 DQKMQQPEKVSVQIDLNSLT 650
++K Q S ++D+ T
Sbjct: 1284 EKKKNQ---CSQELDMKQRT 1300
>gi|40549454 T-cell leukemia virus enhancer factor [Homo sapiens]
Length = 431
Score = 31.2 bits (69), Expect = 4.6
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 171 PASEPNFLLGVSKEVKNRAASLDRLQALAPYSVTSPQPCEMQRTYFPMNIENESISDQDS 230
P +PN + + K+ + A+S + +L+P+ ++S R +I+ +
Sbjct: 191 PEYKPNLIQALKKQPFSSASSQNG--SLSPHYLSSVIKQNQVRNLKESDIDAAAAM---- 244
Query: 231 LPINQSIKETFISNEEPFVVQSCVQKRNIFKEDFHNLMAV----SPSLVGPISKAENEHR 286
+ +N SI++ + E+P +++ +QK+ + FH+ AV S SL I E+ +
Sbjct: 245 MLLNTSIEQGILECEKPLPLKTALQKKRSYGNAFHHPSAVRLQESDSLATSIDPKEDHNY 304
Query: 287 EPQS 290
S
Sbjct: 305 SASS 308
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 31.2 bits (69), Expect = 4.6
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 558 SSPEHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLVLRIGEIERKL----ESL 613
+SPE + +I+ PNSK G R + S+++ +S + E E E +
Sbjct: 61 ASPEREIPEISISQPNSKSSSGTRSGSQQISQDDQSSSPGSSDILGKESEGSRSPDPEQM 120
Query: 614 SGVRDEISQVLGKLNKLDQKMQQPEKVSVQIDLNSLTSEGPSDDSASPRMFHAH 667
+ + E +Q LG + K P K V+ L DSA P H H
Sbjct: 121 TSINGEKAQELGS-SATPTKKTVPFKRGVRRGDVLLMVAKLDPDSAKPEKTHPH 173
>gi|22538426 TRAF3 interacting protein 2 isoform 1 [Homo sapiens]
Length = 574
Score = 31.2 bits (69), Expect = 4.6
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 22/189 (11%)
Query: 307 PYNSQYLNPV--YSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQ----EARRCLGKPNK 360
PY SQ L P+ YSP ++ ++ ++ ++ PT + + +A L N
Sbjct: 23 PYPSQLLKPIPEYSP-EEESEPPAPNIRNMAPNSLSAPTMLHNSSGDFSQAHSTLKLANH 81
Query: 361 QTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ 420
Q P + L T+ + D E SF R+P K +P+ S PA E L + Q
Sbjct: 82 QRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKA-FPSGCSAVSE-PASESVVGALPAEHQ 139
Query: 421 QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEH 480
++ K+N ++S+ H+ K D+S+ ++ S+G E
Sbjct: 140 -----FSFMEKRNQWLVSQLSAASPDTGHDSDK--SDQSLP------NASADSLGGSQEM 186
Query: 481 VLEPKKCRD 489
V P+ R+
Sbjct: 187 VQRPQPHRN 195
>gi|22538428 TRAF3 interacting protein 2 isoform 2 [Homo sapiens]
Length = 565
Score = 31.2 bits (69), Expect = 4.6
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 22/189 (11%)
Query: 307 PYNSQYLNPV--YSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQ----EARRCLGKPNK 360
PY SQ L P+ YSP ++ ++ ++ ++ PT + + +A L N
Sbjct: 14 PYPSQLLKPIPEYSP-EEESEPPAPNIRNMAPNSLSAPTMLHNSSGDFSQAHSTLKLANH 72
Query: 361 QTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ 420
Q P + L T+ + D E SF R+P K +P+ S PA E L + Q
Sbjct: 73 QRPVSRQVTCLRTQVLEDSEDSFCRRHPGLGKA-FPSGCSAVSE-PASESVVGALPAEHQ 130
Query: 421 QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEH 480
++ K+N ++S+ H+ K D+S+ ++ S+G E
Sbjct: 131 -----FSFMEKRNQWLVSQLSAASPDTGHDSDK--SDQSLP------NASADSLGGSQEM 177
Query: 481 VLEPKKCRD 489
V P+ R+
Sbjct: 178 VQRPQPHRN 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,495,554
Number of Sequences: 37866
Number of extensions: 1857686
Number of successful extensions: 4764
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 4689
Number of HSP's gapped (non-prelim): 131
length of query: 916
length of database: 18,247,518
effective HSP length: 111
effective length of query: 805
effective length of database: 14,044,392
effective search space: 11305735560
effective search space used: 11305735560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.