Guide to the Human Genome
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Name: PRUNE2 Sequence: fasta or formatted (3088aa) NCBI GI: 162287219
Description:

prune homolog 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3        164           2
 C cysteine            1.2         37           2
 D aspartate           7.7        237           3
 E glutamate          11.1        343           3
 F phenylalanine       3.0         93           2
 G glycine             5.8        180           3
 H histidine           2.5         76           2
 I isoleucine          4.5        138           2
 K lysine              4.4        135           2
 L leucine             7.7        237           2
 M methionine          1.9         58           2
 N asparagine          4.9        150           2
 P proline             7.1        219           2
 Q glutamine           4.2        129           2
 R arginine            3.1         97           3
 S serine             12.9        397           4
 T threonine           5.3        165           2
 V valine              4.3        133           2
 W tryptophan          1.5         45           2
 Y tyrosine            1.8         55           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prune homolog 2 
ATCAY                 0.057   caytaxin 
BNIP2                 0.051   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom...
BNIPL                 0.036   BCL2/adenovirus E1B 19kD interacting protein like i...
BNIPL                 0.035   BCL2/adenovirus E1B 19kD interacting protein like i...
PRUNE                 0.030   prune 
ARHGAP1               0.014   Rho GTPase activating protein 1 
LOC553158             0.013   PRR5-ARHGAP8 fusion protein 
DSPP                  0.013   dentin sialophosphoprotein preproprotein 
ARHGAP8               0.013   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.010   Rho GTPase activating protein 8 isoform 1 
GDAP2                 0.006   ganglioside induced differentiation associated prot...
GDAP2                 0.005   ganglioside induced differentiation associated protei...
ANK2                  0.004   ankyrin 2 isoform 1 
MUC12                 0.004   PREDICTED: mucin 12 
LEO1                  0.004   Leo1, Paf1/RNA polymerase II complex component, homo...
DMP1                  0.003   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.003   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
C9orf86               0.003   Rab-like GTP-binding protein 1 isoform 1 
PCLO                  0.003   piccolo isoform 2 
PCLO                  0.003   piccolo isoform 1 
C16orf88              0.003   hypothetical protein LOC400506 
ZDBF2                 0.003   zinc finger, DBF-type containing 2 
SYTL2                 0.003   synaptotagmin-like 2 isoform i 
AP3B1                 0.003   adaptor-related protein complex 3, beta 1 subunit [H...
ACRC                  0.002   ACRC protein 
SYTL2                 0.002   synaptotagmin-like 2 isoform a 
SYTL2                 0.002   synaptotagmin-like 2 isoform g 
SLTM                  0.002   modulator of estrogen induced transcription isoform ...
MAP1B                 0.002   microtubule-associated protein 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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