CHD1 34793

Name: CHD1	Sequence: fasta or formatted (1710aa)		NCBI GI: 68299795
Description: chromodomain helicase DNA binding protein 1		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 70 2 C cysteine 1.2 20 2 D aspartate 7.5 129 3 E glutamate 9.2 158 4 F phenylalanine 2.6 45 1 G glycine 5.6 96 2 H histidine 3.6 62 2 I isoleucine 4.8 82 2 K lysine 9.4 161 3 L leucine 8.1 138 2 M methionine 1.5 26 2 N asparagine 3.9 66 2 P proline 3.7 64 2 Q glutamine 5.0 85 9 R arginine 6.7 115 3 S serine 11.8 202 4 T threonine 3.6 62 3 V valine 3.0 51 2 W tryptophan 1.5 26 1 Y tyrosine 3.0 52 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chromodomain helicase DNA binding protein 1 CHD2 0.564 chromodomain helicase DNA binding protein 2 isoform... CHD4 0.158 chromodomain helicase DNA binding protein 4 CHD3 0.157 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.157 chromodomain helicase DNA binding protein 3 isoform ... CHD3 0.157 chromodomain helicase DNA binding protein 3 isoform... CHD5 0.150 chromodomain helicase DNA binding protein 5 CHD7 0.143 chromodomain helicase DNA binding protein 7 CHD8 0.143 chromodomain helicase DNA binding protein 8 CHD6 0.142 chromodomain helicase DNA binding protein 6 CHD9 0.137 chromodomain helicase DNA binding protein 9 CHD2 0.129 chromodomain helicase DNA binding protein 2 isoform... SMARCA1 0.122 SWI/SNF-related matrix-associated actin-dependent r... SMARCA1 0.120 SWI/SNF-related matrix-associated actin-dependent re... SMARCA5 0.118 SWI/SNF-related matrix-associated actin-dependent re... CHD1L 0.112 chromodomain helicase DNA binding protein 1-like [H... SMARCA4 0.110 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.110 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.108 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.108 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.108 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.108 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.107 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.107 SWI/SNF-related matrix-associated actin-dependent re... SMARCA4 0.104 SWI/SNF-related matrix-associated actin-dependent r... SMARCAD1 0.079 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.079 SWI/SNF-related, matrix-associated actin-dependent ... SMARCAD1 0.079 SWI/SNF-related, matrix-associated actin-dependent ... ERCC6 0.067 excision repair cross-complementing rodent repair def... BTAF1 0.065 BTAF1 RNA polymerase II, B-TFIID transcription facto... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.