Guide to the Human Genome
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Name: MYO18B Sequence: fasta or formatted (2567aa) NCBI GI: 51317366
Description:

myosin XVIIIB

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6        195           4
 C cysteine            1.5         38           2
 D aspartate           5.1        130           3
 E glutamate           9.8        251           3
 F phenylalanine       2.4         61           1
 G glycine             7.2        186           3
 H histidine           1.9         49           2
 I isoleucine          2.8         73           2
 K lysine              7.1        181           2
 L leucine            10.6        273           3
 M methionine          2.0         51           1
 N asparagine          1.8         45           1
 P proline             4.8        124           4
 Q glutamine           7.4        191           3
 R arginine            7.2        185           3
 S serine              9.0        230           5
 T threonine           4.9        126           2
 V valine              5.0        129           2
 W tryptophan          1.0         26           2
 Y tyrosine            0.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin XVIIIB 
MYO18A                0.270   myosin 18A isoform b 
MYO18A                0.270   myosin 18A isoform a 
MYH11                 0.079   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.079   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.078   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH10                 0.077   myosin, heavy polypeptide 10, non-muscle 
MYH9                  0.075   myosin, heavy polypeptide 9, non-muscle 
MYH14                 0.069   myosin, heavy chain 14 isoform 2 
MYH8                  0.069   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH7                  0.069   myosin, heavy chain 7, cardiac muscle, beta 
MYH14                 0.069   myosin, heavy chain 14 isoform 1 
MYH4                  0.069   myosin, heavy polypeptide 4, skeletal muscle 
MYH6                  0.069   myosin heavy chain 6 
MYH14                 0.068   myosin, heavy chain 14 isoform 3 
MYH15                 0.068   myosin, heavy polypeptide 15 
MYH2                  0.068   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.068   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH7B                 0.068   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH3                  0.067   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH1                  0.067   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH13                 0.066   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYO5A                 0.041   myosin VA isoform 2 
MYO5A                 0.041   myosin VA isoform 1 
MYO5C                 0.039   myosin VC 
MYO5B                 0.038   myosin VB 
MYO10                 0.037   myosin X 
MYO7A                 0.033   myosin VIIA isoform 2 
MYO7A                 0.033   myosin VIIA isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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