Guide to the Human Genome
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Name: FOXN2 Sequence: fasta or formatted (431aa) NCBI GI: 40549454
Description:

T-cell leukemia virus enhancer factor

Referenced in:

FOX Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         33           4
 C cysteine            2.1          9           1
 D aspartate           5.6         24           2
 E glutamate           7.0         30           2
 F phenylalanine       2.3         10           1
 G glycine             6.0         26           1
 H histidine           2.8         12           2
 I isoleucine          4.6         20           1
 K lysine              8.1         35           2
 L leucine             9.0         39           2
 M methionine          1.9          8           2
 N asparagine          4.4         19           1
 P proline             6.3         27           2
 Q glutamine           4.4         19           1
 R arginine            2.8         12           1
 S serine             12.8         55           2
 T threonine           3.9         17           1
 V valine              4.2         18           1
 W tryptophan          0.9          4           1
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell leukemia virus enhancer factor 
FOXN3                 0.350   checkpoint suppressor 1 isoform 1 
FOXN3                 0.327   checkpoint suppressor 1 isoform 2 
FOXN1                 0.105   forkhead box N1 
FOXJ3                 0.097   forkhead box J3 
FOXN4                 0.093   forkhead box N4 
FOXJ1                 0.090   forkhead box J1 
FOXC2                 0.084   forkhead box C2 
FOXJ2                 0.084   forkhead box J2 
FOXI1                 0.083   forkhead box I1 isoform a 
FOXK2                 0.083   forkhead box K2 
FOXA2                 0.082   forkhead box A2 isoform 2 
FOXC1                 0.082   forkhead box C1 
FOXA2                 0.082   forkhead box A2 isoform 1 
FOXG1                 0.080   forkhead box G1 
FOXK1                 0.080   forkhead box K1 
FOXA3                 0.080   forkhead box A3 
FOXL1                 0.080   forkhead box L1 
FOXA1                 0.079   forkhead box A1 
FOXF2                 0.079   forkhead box F2 
FOXF1                 0.079   forkhead box F1 
FOXI2                 0.077   forkhead box I2 
FOXI3                 0.077   forkhead box I3 
FOXL2                 0.075   forkhead box L2 
FOXM1                 0.075   forkhead box M1 isoform 2 
FOXM1                 0.075   forkhead box M1 isoform 1 
FOXE1                 0.075   forkhead box E1 
FOXB1                 0.075   forkhead box B1 
FOXM1                 0.073   forkhead box M1 isoform 3 
FOXE3                 0.073   forkhead box E3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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