Guide to the Human Genome
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Name: KIAA1024 Sequence: fasta or formatted (916aa) NCBI GI: 54606888
Description:

hypothetical protein LOC23251

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         49           4
 C cysteine            2.7         25           2
 D aspartate           5.8         53           3
 E glutamate           7.6         70           3
 F phenylalanine       3.4         31           2
 G glycine             3.8         35           2
 H histidine           2.3         21           2
 I isoleucine          4.4         40           1
 K lysine              8.3         76           2
 L leucine             7.9         72           2
 M methionine          2.0         18           1
 N asparagine          5.3         49           2
 P proline             7.1         65           2
 Q glutamine           4.7         43           2
 R arginine            5.0         46           2
 S serine             11.4        104           2
 T threonine           5.0         46           1
 V valine              4.8         44           2
 W tryptophan          0.8          7           1
 Y tyrosine            2.4         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23251 
KIAA1024L             0.035   PREDICTED: hypothetical protein LOC100127206 
KIAA1024L             0.035   PREDICTED: hypothetical protein LOC100127206 
KIAA1024L             0.035   PREDICTED: hypothetical protein LOC100127206 
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
LIMCH1                0.008   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.007   LIM and calponin homology domains 1 isoform a [Homo...
CHD1                  0.006   chromodomain helicase DNA binding protein 1 
LIMCH1                0.005   LIM and calponin homology domains 1 isoform e [Homo...
LIMCH1                0.005   LIM and calponin homology domains 1 isoform d [Homo...
LIMCH1                0.005   LIM and calponin homology domains 1 isoform c [Homo...
MLLT1                 0.005   myeloid/lymphoid or mixed-lineage leukemia (trithora...
PRUNE2                0.005   prune homolog 2 
NIPBL                 0.005   delangin isoform B 
NIPBL                 0.005   delangin isoform A 
TRIM15                0.004   tripartite motif protein 15 
DACT1                 0.004   dapper 1 isoform 1 
RIPK2                 0.004   receptor-interacting serine-threonine kinase 2 
TRIP12                0.004   thyroid hormone receptor interactor 12 
INCENP                0.004   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.004   inner centromere protein antigens 135/155kDa isofor...
NUP214                0.004   nucleoporin 214kDa 
KIF21B                0.004   kinesin family member 21B 
KIAA1731              0.004   hypothetical protein LOC85459 
SLC13A4               0.004   solute carrier family 13 (sodium/sulfate symporters)...
KIF20B                0.004   M-phase phosphoprotein 1 
FOXN2                 0.003   T-cell leukemia virus enhancer factor 
MYO18B                0.003   myosin XVIIIB 
TRAF3IP2              0.003   TRAF3 interacting protein 2 isoform 1 
TRAF3IP2              0.003   TRAF3 interacting protein 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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