ARID3B 32549

Name: ARID3B	Sequence: fasta or formatted (560aa)		NCBI GI: 5453638
Description: AT rich interactive domain 3B		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.2 63 5 C cysteine 0.4 2 1 D aspartate 4.3 24 2 E glutamate 6.8 38 3 F phenylalanine 2.5 14 2 G glycine 7.0 39 2 H histidine 1.1 6 1 I isoleucine 3.6 20 2 K lysine 5.0 28 2 L leucine 9.1 51 2 M methionine 2.1 12 1 N asparagine 2.9 16 1 P proline 7.7 43 2 Q glutamine 7.5 42 11 R arginine 6.1 34 2 S serine 10.0 56 6 T threonine 5.9 33 2 V valine 4.1 23 2 W tryptophan 0.7 4 1 Y tyrosine 2.1 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 3B ARID3A 0.312 AT rich interactive domain 3A (BRIGHT- like) protein ... ARID3C 0.223 AT rich interactive domain 3C (BRIGHT- like) ARID1B 0.075 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.075 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.074 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1A 0.067 AT rich interactive domain 1A isoform a ARID1A 0.067 AT rich interactive domain 1A isoform b ARID4A 0.056 retinoblastoma-binding protein 1 isoform III ARID4A 0.056 retinoblastoma-binding protein 1 isoform II ARID4A 0.056 retinoblastoma-binding protein 1 isoform I ARID4B 0.048 AT rich interactive domain 4B isoform 2 ARID4B 0.048 AT rich interactive domain 4B isoform 1 ARID2 0.044 AT rich interactive domain 2 (ARID, RFX-like) ARID5A 0.029 AT rich interactive domain 5A KDM5A 0.029 retinoblastoma binding protein 2 isoform 1 KDM5A 0.029 retinoblastoma binding protein 2 isoform 2 KDM5C 0.027 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.025 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5D 0.025 jumonji, AT rich interactive domain 1D isoform 1 [H... ARID5B 0.022 AT rich interactive domain 5B (MRF1-like) SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.019 SWI/SNF-related matrix-associated actin-dependent re... TBP 0.019 TATA box binding protein JARID2 0.019 jumonji, AT rich interactive domain 2 protein KDM5B 0.016 jumonji, AT rich interactive domain 1B LOC100130174 0.016 PREDICTED: hypothetical protein LOC100133760 0.016 PREDICTED: similar to Jumonji, AT rich interactive ... PHC1 0.016 polyhomeotic 1-like NCOA6 0.016 nuclear receptor coactivator 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.