JARID2 2211

Name: JARID2	Sequence: fasta or formatted (1246aa)		NCBI GI: 11863152
Description: jumonji, AT rich interactive domain 2 protein		Referenced in: Histones, Related Proteins, and Modifying Enzymes Additional Genes in Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 80 3 C cysteine 2.3 29 2 D aspartate 3.6 45 2 E glutamate 8.1 101 4 F phenylalanine 2.4 30 2 G glycine 7.0 87 3 H histidine 3.7 46 3 I isoleucine 3.1 39 2 K lysine 9.2 115 3 L leucine 7.7 96 2 M methionine 1.8 23 1 N asparagine 3.8 47 2 P proline 6.0 75 3 Q glutamine 4.6 57 2 R arginine 6.7 84 3 S serine 9.6 119 4 T threonine 5.1 64 2 V valine 6.1 76 2 W tryptophan 1.0 12 1 Y tyrosine 1.7 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 jumonji, AT rich interactive domain 2 protein KDM5A 0.049 retinoblastoma binding protein 2 isoform 1 KDM5A 0.049 retinoblastoma binding protein 2 isoform 2 KDM5C 0.048 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM5C 0.048 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.047 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.047 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5B 0.044 jumonji, AT rich interactive domain 1B LOC100133760 0.044 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5D 0.042 jumonji, AT rich interactive domain 1D isoform 1 [H... LOC100129053 0.025 PREDICTED: hypothetical protein LOC100129053 0.025 PREDICTED: hypothetical protein LOC100129053 0.025 PREDICTED: hypothetical protein KDM4D 0.024 jumonji domain containing 2D KDM4C 0.022 jumonji domain containing 2C isoform 3 KDM4C 0.022 jumonji domain containing 2C isoform 4 KDM4C 0.022 jumonji domain containing 2C isoform 2 KDM4C 0.022 jumonji domain containing 2C isoform 1 LOC390245 0.022 PREDICTED: hypothetical protein LOC390245 0.022 PREDICTED: hypothetical protein LOC390245 0.022 PREDICTED: hypothetical protein KDM4B 0.022 jumonji domain containing 2B KDM4A 0.020 jumonji domain containing 2A NOLC1 0.011 nucleolar and coiled-body phosphoprotein 1 BOD1L 0.010 biorientation of chromosomes in cell division 1-like... ARID2 0.010 AT rich interactive domain 2 (ARID, RFX-like) ARID1B 0.010 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.010 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.010 AT rich interactive domain 1B (SWI1-like) isoform 1 ... FLJ37078 0.009 hypothetical protein LOC222183 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.