ARID5B 35461

Name: ARID5B	Sequence: fasta or formatted (1188aa)		NCBI GI: 74136549
Description: AT rich interactive domain 5B (MRF1-like)		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 74 3 C cysteine 1.7 20 2 D aspartate 4.6 55 2 E glutamate 7.2 86 3 F phenylalanine 3.0 36 3 G glycine 5.6 66 3 H histidine 4.0 47 2 I isoleucine 3.8 45 1 K lysine 9.0 107 3 L leucine 9.3 111 2 M methionine 1.6 19 1 N asparagine 3.9 46 3 P proline 8.2 97 3 Q glutamine 4.9 58 2 R arginine 4.5 54 2 S serine 10.9 130 3 T threonine 4.0 48 2 V valine 4.1 49 2 W tryptophan 0.5 6 1 Y tyrosine 2.9 34 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 5B (MRF1-like) ARID5A 0.070 AT rich interactive domain 5A ARID4B 0.028 AT rich interactive domain 4B isoform 1 ARID4B 0.028 AT rich interactive domain 4B isoform 2 ARID4A 0.023 retinoblastoma-binding protein 1 isoform III ARID4A 0.023 retinoblastoma-binding protein 1 isoform II ARID4A 0.023 retinoblastoma-binding protein 1 isoform I ARID2 0.015 AT rich interactive domain 2 (ARID, RFX-like) ARID1B 0.012 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.012 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.012 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID3C 0.012 AT rich interactive domain 3C (BRIGHT- like) KDM5B 0.011 jumonji, AT rich interactive domain 1B LOC100133760 0.011 PREDICTED: similar to Jumonji, AT rich interactive ... ARID3A 0.011 AT rich interactive domain 3A (BRIGHT- like) protein ... MLLT1 0.010 myeloid/lymphoid or mixed-lineage leukemia (trithora... KDM5A 0.010 retinoblastoma binding protein 2 isoform 1 KDM5A 0.010 retinoblastoma binding protein 2 isoform 2 ARID3B 0.010 AT rich interactive domain 3B KDM5C 0.010 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.010 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5D 0.010 jumonji, AT rich interactive domain 1D isoform 1 [H... NEFH 0.010 neurofilament, heavy polypeptide 200kDa NACAD 0.009 NAC alpha domain containing NACAD 0.009 PREDICTED: NAC alpha domain containing NOLC1 0.009 nucleolar and coiled-body phosphoprotein 1 AEBP1 0.009 adipocyte enhancer binding protein 1 precursor [Homo... SRRM2 0.009 splicing coactivator subunit SRm300 NEFM 0.009 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.009 neurofilament, medium polypeptide 150kDa isoform 2 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.