ARID5A 30382

Name: ARID5A	Sequence: fasta or formatted (594aa)		NCBI GI: 47078224
Description: AT rich interactive domain 5A		Referenced in: Nonhistone Chromosomal Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 60 2 C cysteine 2.0 12 1 D aspartate 2.7 16 2 E glutamate 7.2 43 3 F phenylalanine 3.4 20 2 G glycine 9.1 54 2 H histidine 3.2 19 1 I isoleucine 1.5 9 1 K lysine 7.9 47 3 L leucine 9.1 54 2 M methionine 1.9 11 2 N asparagine 1.9 11 1 P proline 11.8 70 2 Q glutamine 3.7 22 2 R arginine 5.4 32 2 S serine 7.7 46 2 T threonine 4.2 25 2 V valine 4.2 25 1 W tryptophan 0.8 5 1 Y tyrosine 2.2 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 5A ARID5B 0.139 AT rich interactive domain 5B (MRF1-like) ARID4B 0.043 AT rich interactive domain 4B isoform 2 ARID4B 0.043 AT rich interactive domain 4B isoform 1 ARID4A 0.038 retinoblastoma-binding protein 1 isoform III ARID4A 0.038 retinoblastoma-binding protein 1 isoform II ARID4A 0.038 retinoblastoma-binding protein 1 isoform I ARID2 0.031 AT rich interactive domain 2 (ARID, RFX-like) ARID1B 0.031 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.031 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ARID1B 0.028 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID3C 0.027 AT rich interactive domain 3C (BRIGHT- like) ARID3B 0.026 AT rich interactive domain 3B ARID3A 0.025 AT rich interactive domain 3A (BRIGHT- like) protein ... KDM5B 0.021 jumonji, AT rich interactive domain 1B LOC100133760 0.021 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5C 0.020 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5A 0.017 retinoblastoma binding protein 2 isoform 1 KDM5A 0.017 retinoblastoma binding protein 2 isoform 2 KDM5D 0.017 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5D 0.017 jumonji, AT rich interactive domain 1D isoform 1 [H... ARID1A 0.016 AT rich interactive domain 1A isoform a ARID1A 0.016 AT rich interactive domain 1A isoform b NACA 0.012 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.012 PREDICTED: hypothetical protein FLJ22184 MLL4 0.012 myeloid/lymphoid or mixed-lineage leukemia 4 BAHCC1 0.012 BAH domain and coiled-coil containing 1 KDM5C 0.012 jumonji, AT rich interactive domain 1C isoform 2 [H... WNK2 0.012 WNK lysine deficient protein kinase 2 RICH2 0.011 Rho GTPase-activating protein RICH2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.