ARID4B 14037

Name: ARID4B	Sequence: fasta or formatted (1312aa)		NCBI GI: 22035677
Description: AT rich interactive domain 4B isoform 1		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [1226aa] AT rich interactive domain 4B isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 65 3 C cysteine 1.4 19 1 D aspartate 7.2 95 4 E glutamate 13.6 178 11 F phenylalanine 2.0 26 1 G glycine 4.3 56 3 H histidine 1.4 19 1 I isoleucine 4.0 53 2 K lysine 11.6 152 3 L leucine 6.1 80 2 M methionine 1.2 16 1 N asparagine 5.0 66 2 P proline 5.1 67 3 Q glutamine 3.0 40 2 R arginine 4.5 59 3 S serine 11.0 144 6 T threonine 4.8 63 2 V valine 6.0 79 2 W tryptophan 0.7 9 1 Y tyrosine 2.0 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 4B isoform 1 ARID4B 0.858 AT rich interactive domain 4B isoform 2 ARID4A 0.349 retinoblastoma-binding protein 1 isoform I ARID4A 0.321 retinoblastoma-binding protein 1 isoform III ARID4A 0.301 retinoblastoma-binding protein 1 isoform II ARID5B 0.026 AT rich interactive domain 5B (MRF1-like) ARID3C 0.024 AT rich interactive domain 3C (BRIGHT- like) ANKRD12 0.023 ankyrin repeat domain 12 isoform 2 ANKRD12 0.023 ankyrin repeat domain 12 isoform 1 MAP1B 0.023 microtubule-associated protein 1B NEFH 0.022 neurofilament, heavy polypeptide 200kDa NOLC1 0.021 nucleolar and coiled-body phosphoprotein 1 DSPP 0.021 dentin sialophosphoprotein preproprotein ARID5A 0.020 AT rich interactive domain 5A ARID3B 0.020 AT rich interactive domain 3B BOD1L 0.019 biorientation of chromosomes in cell division 1-like... ATRX 0.019 transcriptional regulator ATRX isoform 2 ATRX 0.019 transcriptional regulator ATRX isoform 1 CYLC1 0.019 cylicin, basic protein of sperm head cytoskeleton 1... CCAR1 0.019 cell-cycle and apoptosis regulatory protein 1 ARID3A 0.018 AT rich interactive domain 3A (BRIGHT- like) protein ... EIF5B 0.017 eukaryotic translation initiation factor 5B ZC3H13 0.017 zinc finger CCCH-type containing 13 NCL 0.017 nucleolin HUWE1 0.017 HECT, UBA and WWE domain containing 1 LOC283685 0.016 PREDICTED: golgi autoantigen, golgin subfamily a-li... TRDN 0.016 triadin LOC283767 0.016 golgi autoantigen, golgin subfamily a-like RBBP6 0.016 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.016 retinoblastoma-binding protein 6 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.