ARID4B 14038

Name: ARID4B	Sequence: fasta or formatted (1226aa)		NCBI GI: 22035679
Description: AT rich interactive domain 4B isoform 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [1312aa] AT rich interactive domain 4B isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 63 3 C cysteine 1.4 17 1 D aspartate 6.9 84 3 E glutamate 12.4 152 7 F phenylalanine 2.0 25 1 G glycine 4.1 50 3 H histidine 1.5 18 1 I isoleucine 4.2 52 2 K lysine 12.0 147 3 L leucine 6.4 78 2 M methionine 1.1 14 1 N asparagine 5.0 61 2 P proline 5.3 65 3 Q glutamine 3.1 38 2 R arginine 4.6 56 3 S serine 11.6 142 6 T threonine 5.1 62 2 V valine 6.0 73 2 W tryptophan 0.7 8 1 Y tyrosine 1.7 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 AT rich interactive domain 4B isoform 2 ARID4B 0.959 AT rich interactive domain 4B isoform 1 ARID4A 0.328 retinoblastoma-binding protein 1 isoform I ARID4A 0.299 retinoblastoma-binding protein 1 isoform III ARID4A 0.277 retinoblastoma-binding protein 1 isoform II ARID5B 0.028 AT rich interactive domain 5B (MRF1-like) NEFH 0.026 neurofilament, heavy polypeptide 200kDa ARID3C 0.025 AT rich interactive domain 3C (BRIGHT- like) RBBP6 0.024 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.024 retinoblastoma-binding protein 6 isoform 1 ANKRD12 0.024 ankyrin repeat domain 12 isoform 2 ANKRD12 0.024 ankyrin repeat domain 12 isoform 1 NOLC1 0.023 nucleolar and coiled-body phosphoprotein 1 MAP1B 0.022 microtubule-associated protein 1B ARID5A 0.022 AT rich interactive domain 5A ARID3B 0.021 AT rich interactive domain 3B ARID3A 0.020 AT rich interactive domain 3A (BRIGHT- like) protein ... DSPP 0.019 dentin sialophosphoprotein preproprotein BOD1L 0.017 biorientation of chromosomes in cell division 1-like... WDR87 0.017 NYD-SP11 protein ANKRD11 0.017 ankyrin repeat domain 11 GOLGA4 0.017 golgi autoantigen, golgin subfamily a, 4 ARID1B 0.017 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.017 AT rich interactive domain 1B (SWI1-like) isoform 3 ... ATRX 0.016 transcriptional regulator ATRX isoform 2 ATRX 0.016 transcriptional regulator ATRX isoform 1 CALD1 0.016 caldesmon 1 isoform 1 TRDN 0.016 triadin ZC3H13 0.016 zinc finger CCCH-type containing 13 EIF5B 0.015 eukaryotic translation initiation factor 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.