LOC100133760 9271

Name: LOC100133760	Sequence: fasta or formatted (977aa)		NCBI GI: 169218173
Description: PREDICTED: similar to Jumonji, AT rich interactive domain 1B (RBP2-like), partial		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 64 2 C cysteine 3.6 35 1 D aspartate 5.7 56 2 E glutamate 8.7 85 4 F phenylalanine 4.0 39 1 G glycine 4.4 43 3 H histidine 2.7 26 2 I isoleucine 3.7 36 1 K lysine 7.0 68 3 L leucine 10.6 104 3 M methionine 2.9 28 2 N asparagine 3.5 34 2 P proline 6.6 64 3 Q glutamine 4.3 42 2 R arginine 5.4 53 3 S serine 5.3 52 2 T threonine 4.5 44 2 V valine 6.0 59 3 W tryptophan 1.6 16 1 Y tyrosine 3.0 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Jumonji, AT rich interactive ... KDM5B 1.000 jumonji, AT rich interactive domain 1B KDM5A 0.609 retinoblastoma binding protein 2 isoform 1 KDM5A 0.609 retinoblastoma binding protein 2 isoform 2 KDM5C 0.563 jumonji, AT rich interactive domain 1C isoform 1 [H... KDM5D 0.548 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5D 0.540 jumonji, AT rich interactive domain 1D isoform 1 [H... KDM5D 0.499 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5C 0.468 jumonji, AT rich interactive domain 1C isoform 2 [H... KDM4A 0.056 jumonji domain containing 2A KDM4D 0.056 jumonji domain containing 2D JARID2 0.055 jumonji, AT rich interactive domain 2 protein KDM4C 0.054 jumonji domain containing 2C isoform 3 LOC390245 0.054 PREDICTED: hypothetical protein LOC390245 0.054 PREDICTED: hypothetical protein LOC390245 0.054 PREDICTED: hypothetical protein KDM4C 0.054 jumonji domain containing 2C isoform 4 KDM4C 0.054 jumonji domain containing 2C isoform 2 KDM4C 0.054 jumonji domain containing 2C isoform 1 LOC100129053 0.054 PREDICTED: hypothetical protein LOC100129053 0.054 PREDICTED: hypothetical protein LOC100129053 0.054 PREDICTED: hypothetical protein KDM4B 0.054 jumonji domain containing 2B MLL2 0.026 myeloid/lymphoid or mixed-lineage leukemia 2 MLL3 0.024 myeloid/lymphoid or mixed-lineage leukemia 3 PHRF1 0.024 PHD and ring finger domains 1 RSF1 0.022 remodeling and spacing factor 1 BAZ1B 0.021 bromodomain adjacent to zinc finger domain, 1B [Homo... BAZ2A 0.021 bromodomain adjacent to zinc finger domain, 2A [Homo... BAZ2B 0.020 bromodomain adjacent to zinc finger domain, 2B [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.