Guide to the Human Genome
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Name: CBLB Sequence: fasta or formatted (982aa) NCBI GI: 54112420
Description:

Cas-Br-M (murine) ecotropic retroviral transforming sequence b

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         48           3
 C cysteine            2.6         26           2
 D aspartate           6.8         67           5
 E glutamate           5.1         50           2
 F phenylalanine       3.3         32           2
 G glycine             6.1         60           2
 H histidine           2.9         28           2
 I isoleucine          5.0         49           2
 K lysine              5.6         55           2
 L leucine             9.2         90           2
 M methionine          1.9         19           2
 N asparagine          4.1         40           2
 P proline            12.5        123           6
 Q glutamine           3.8         37           1
 R arginine            6.8         67           2
 S serine              8.1         80           3
 T threonine           3.8         37           2
 V valine              4.4         43           2
 W tryptophan          0.8          8           1
 Y tyrosine            2.3         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Cas-Br-M (murine) ecotropic retroviral transforming ... 
CBL                   0.396   Cas-Br-M (murine) ecotropic retroviral transforming ...
CBLC                  0.190   Cas-Br-M (murine) ecotropic retroviral transforming...
CBLC                  0.144   Cas-Br-M (murine) ecotropic retroviral transforming...
RAPH1                 0.020   Ras association and pleckstrin homology domains 1 is...
FLJ22184              0.019   PREDICTED: hypothetical protein FLJ22184 
RERE                  0.019   atrophin-1 like protein isoform b 
RERE                  0.019   atrophin-1 like protein isoform a 
RERE                  0.019   atrophin-1 like protein isoform a 
KDM6B                 0.017   lysine (K)-specific demethylase 6B 
WIPF3                 0.016   WAS/WASL interacting protein family, member 3 [Homo...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: hypothetical protein LOC647024 
PCLO                  0.015   piccolo isoform 2 
PCLO                  0.015   piccolo isoform 1 
WBP11                 0.014   WW domain binding protein 11 
MYO15A                0.014   myosin XV 
FMNL1                 0.013   formin-like 1 
RBM33                 0.013   RNA binding motif protein 33 
WIPF1                 0.013   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.013   WAS/WASL interacting protein family, member 1 
WASL                  0.013   Wiskott-Aldrich syndrome gene-like protein 
ZFHX4                 0.013   zinc finger homeodomain 4 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
PELP1                 0.013   proline, glutamic acid and leucine rich protein 1 [...
FASLG                 0.012   fas ligand 
SCAF1                 0.012   SR-related CTD-associated factor 1 
LATS1                 0.012   LATS homolog 1 
LMOD2                 0.012   leiomodin 2 (cardiac) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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