Guide to the Human Genome
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Name: FASLG Sequence: fasta or formatted (281aa) NCBI GI: 4557329
Description:

fas ligand

Referenced in:

TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2          9           1
 C cysteine            1.4          4           1
 D aspartate           1.4          4           1
 E glutamate           4.6         13           2
 F phenylalanine       3.9         11           2
 G glycine             6.8         19           2
 H histidine           2.5          7           1
 I isoleucine          1.4          4           1
 K lysine              5.7         16           2
 L leucine            12.5         35           2
 M methionine          4.3         12           2
 N asparagine          3.6         10           2
 P proline            13.9         39           9
 Q glutamine           4.3         12           2
 R arginine            3.9         11           2
 S serine              9.3         26           2
 T threonine           4.3         12           2
 V valine              6.8         19           1
 W tryptophan          1.4          4           1
 Y tyrosine            5.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fas ligand 
TNFSF14               0.101   tumor necrosis factor ligand superfamily, member 14 ...
TNFSF14               0.099   tumor necrosis factor ligand superfamily, member 14 ...
LTA                   0.087   lymphotoxin alpha precursor 
LTA                   0.087   lymphotoxin alpha precursor 
TNFSF15               0.087   tumor necrosis factor (ligand) superfamily, member 1...
TNF                   0.076   tumor necrosis factor alpha 
TNFSF10               0.072   tumor necrosis factor (ligand) superfamily, member 10...
FMN1                  0.071   formin 1 
FMNL2                 0.069   formin-like 2 
LOC645529             0.067   PREDICTED: similar to Putative acrosin-like proteas...
FLJ20021              0.065   PREDICTED: hypothetical protein 
FLJ20021              0.065   PREDICTED: hypothetical protein 
FLJ20021              0.065   PREDICTED: hypothetical protein 
FMNL1                 0.065   formin-like 1 
PCLO                  0.062   piccolo isoform 2 
PCLO                  0.062   piccolo isoform 1 
ACR                   0.062   acrosin precursor 
ZFHX4                 0.062   zinc finger homeodomain 4 
ENAH                  0.060   enabled homolog isoform a 
ENAH                  0.060   enabled homolog isoform b 
SETBP1                0.058   SET binding protein 1 isoform a 
RAPH1                 0.058   Ras association and pleckstrin homology domains 1 is...
LMOD2                 0.058   leiomodin 2 (cardiac) 
EVL                   0.057   Enah/Vasp-like 
TNFSF11               0.057   tumor necrosis factor ligand superfamily, member 11 ...
TNFSF11               0.057   tumor necrosis factor ligand superfamily, member 11 i...
WAS                   0.055   Wiskott-Aldrich syndrome protein 
ZNF341                0.055   zinc finger protein 341 
ASXL3                 0.055   additional sex combs like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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