Guide to the Human Genome
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Name: LATS1 Sequence: fasta or formatted (1130aa) NCBI GI: 4758666
Description:

LATS homolog 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         64           5
 C cysteine            0.8          9           1
 D aspartate           4.8         54           2
 E glutamate           5.7         64           3
 F phenylalanine       3.1         35           2
 G glycine             5.3         60           2
 H histidine           2.6         29           2
 I isoleucine          4.6         52           2
 K lysine              5.7         64           2
 L leucine             5.8         66           2
 M methionine          3.1         35           2
 N asparagine          5.8         65           2
 P proline            10.6        120           5
 Q glutamine           6.8         77           2
 R arginine            5.8         65           2
 S serine              9.7        110           3
 T threonine           4.9         55           2
 V valine              5.0         57           2
 W tryptophan          1.2         14           2
 Y tyrosine            3.1         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   LATS homolog 1 
LATS2                 0.438   LATS, large tumor suppressor, homolog 2 
STK38L                0.157   serine/threonine kinase 38 like 
STK38                 0.153   serine/threonine kinase 38 
CDC42BPA              0.099   CDC42-binding protein kinase alpha isoform B 
CDC42BPA              0.099   CDC42-binding protein kinase alpha isoform A 
ROCK1                 0.099   Rho-associated, coiled-coil containing protein kinase...
CDC42BPG              0.096   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
ROCK2                 0.096   Rho-associated, coiled-coil containing protein kinas...
CDC42BPB              0.096   CDC42-binding protein kinase beta 
DMPK                  0.095   myotonic dystrophy protein kinase isoform 4 
DMPK                  0.095   myotonic dystrophy protein kinase isoform 3 
DMPK                  0.095   myotonic dystrophy protein kinase isoform 2 
MAST4                 0.093   microtubule associated serine/threonine kinase fami...
DMPK                  0.093   myotonic dystrophy protein kinase isoform 1 
MAST3                 0.089   microtubule associated serine/threonine kinase 3 [H...
MAST2                 0.088   microtubule associated serine/threonine kinase 2 [H...
RPS6KA3               0.085   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
MAST1                 0.084   microtubule associated serine/threonine kinase 1 [Ho...
RPS6KA2               0.084   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.084   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
CIT                   0.083   citron 
RPS6KA1               0.081   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.081   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
PRKACA                0.081   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACG                0.079   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
PRKACA                0.079   cAMP-dependent protein kinase catalytic subunit alph...
RPS6KA6               0.079   ribosomal protein S6 kinase polypeptide 6 
PRKACB                0.077   cAMP-dependent protein kinase catalytic subunit beta...
PRKACB                0.077   cAMP-dependent protein kinase catalytic subunit beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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