Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP4-7 Sequence: fasta or formatted (155aa) NCBI GI: 225690558
Description:

keratin associated protein 4-7

Referenced in:

Keratins

Other entries for this name:
alt mRNA [155aa] PREDICTED: keratin associated protein 4-7
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.6          1           1
 C cysteine           34.8         54           3
 D aspartate           1.3          2           1
 E glutamate           1.3          2           1
 F phenylalanine       0.0          0           0
 G glycine             1.9          3           1
 H histidine           1.3          2           1
 I isoleucine          1.3          2           1
 K lysine              0.6          1           1
 L leucine             1.9          3           1
 M methionine          1.3          2           1
 N asparagine          0.0          0           0
 P proline             9.7         15           1
 Q glutamine           6.5         10           1
 R arginine            8.4         13           1
 S serine             13.5         21           2
 T threonine           9.0         14           2
 V valine              5.2          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 4-7 
KRTAP4-7              1.000   PREDICTED: keratin associated protein 4-7 
KRTAP4-9              0.904   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-9              0.877   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.871   keratin associated protein 4-9 
KRTAP4-8              0.863   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.863   keratin associated protein 4.8 
KRTAP4-8              0.855   PREDICTED: keratin associated protein 4-8 
KRTAP4-11             0.849   keratin associated protein 4-11 
KRTAP4-8              0.841   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.841   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.830   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.830   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.819   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.819   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.814   keratin associated protein 4-12 
KRTAP4-5              0.729   keratin associated protein 4-5 
KRTAP4-3              0.690   keratin associated protein 4-3 
KRTAP4-2              0.658   keratin associated protein 4-2 
KRTAP4-4              0.622   keratin associated protein 4.4 
KRTAP4-1              0.499   keratin associated protein 4-1 
LOC728318             0.455   PREDICTED: hypothetical protein 
LOC728318             0.455   PREDICTED: hypothetical protein 
LOC728318             0.452   PREDICTED: hypothetical protein 
KRTAP9-4              0.416   keratin associated protein 9-4 
LOC728341             0.403   PREDICTED: keratin-associated protein 9-2-like 1-li...
KRTAP9-2              0.403   keratin associated protein 9.2 
KRTAP9-3              0.403   keratin associated protein 9.3 
KRTAP9-8              0.389   keratin associated protein 9.8 
KRTAP10-11            0.386   keratin associated protein 10-11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press