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Search of human proteins with 51242945
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51242945 striatin, calmodulin binding protein [Homo sapiens]
(780 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51242945 striatin, calmodulin binding protein [Homo sapiens] 1564 0.0
gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens] 998 0.0
gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens] 783 0.0
gi|89886480 zinedin isoform 2 [Homo sapiens] 707 0.0
gi|89886477 zinedin isoform 1 [Homo sapiens] 707 0.0
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens] 119 8e-27
gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens] 119 8e-27
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens] 117 4e-26
gi|115298668 WD repeat domain 57 (U5 snRNP specific) [Homo sapiens] 84 5e-16
gi|239787760 WD repeat domain 51A isoform 2 [Homo sapiens] 83 1e-15
gi|239787754 WD repeat domain 51A isoform 1 [Homo sapiens] 83 1e-15
gi|148536855 coatomer protein complex, subunit alpha isoform 1 [... 80 7e-15
gi|148536853 coatomer protein complex, subunit alpha isoform 2 [... 80 7e-15
gi|4557741 platelet-activating factor acetylhydrolase, isoform I... 79 2e-14
gi|32189425 WD repeat domain 69 [Homo sapiens] 79 2e-14
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s... 76 1e-13
gi|5174447 guanine nucleotide binding protein (G protein), beta ... 76 1e-13
gi|4505895 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [... 74 7e-13
gi|26665869 WD repeat domain 51B [Homo sapiens] 74 7e-13
gi|21071067 TBP-associated factor 5 [Homo sapiens] 72 2e-12
gi|213021190 transducin beta-like 1X isoform b [Homo sapiens] 72 2e-12
gi|213021188 transducin beta-like 1X isoform b [Homo sapiens] 72 2e-12
gi|213021186 transducin beta-like 1X isoform a [Homo sapiens] 72 2e-12
gi|5032159 transducin beta-like 1X isoform a [Homo sapiens] 72 2e-12
gi|16554629 WD repeat domain 5 [Homo sapiens] 72 3e-12
gi|16554627 WD repeat domain 5 [Homo sapiens] 72 3e-12
gi|21536371 telomerase-associated protein 1 [Homo sapiens] 70 6e-12
gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens] 70 6e-12
gi|62234461 Notchless gene homolog isoform a [Homo sapiens] 70 7e-12
gi|13376840 WD repeat domain 61 [Homo sapiens] 69 1e-11
>gi|51242945 striatin, calmodulin binding protein [Homo sapiens]
Length = 780
Score = 1564 bits (4049), Expect = 0.0
Identities = 780/780 (100%), Positives = 780/780 (100%)
Query: 1 MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEW 60
MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEW
Sbjct: 1 MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEW 60
Query: 61 ARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLK 120
ARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLK
Sbjct: 61 ARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLK 120
Query: 121 YGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS 180
YGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS
Sbjct: 121 YGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS 180
Query: 181 KRVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESA 240
KRVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESA
Sbjct: 181 KRVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESA 240
Query: 241 AADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNE 300
AADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNE
Sbjct: 241 AADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNE 300
Query: 301 SRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLAN 360
SRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLAN
Sbjct: 301 SRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLAN 360
Query: 361 LRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESE 420
LRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESE
Sbjct: 361 LRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESE 420
Query: 421 LGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHPIEPVLIT 480
LGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHPIEPVLIT
Sbjct: 421 LGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHPIEPVLIT 480
Query: 481 ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLI 540
ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLI
Sbjct: 481 ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLI 540
Query: 541 QGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE 600
QGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE
Sbjct: 541 QGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE 600
Query: 601 VAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTT 660
VAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTT
Sbjct: 601 VAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTT 660
Query: 661 ANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLY 720
ANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLY
Sbjct: 661 ANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLY 720
Query: 721 LMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780
LMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV
Sbjct: 721 LMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780
>gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens]
Length = 797
Score = 998 bits (2580), Expect = 0.0
Identities = 505/787 (64%), Positives = 616/787 (78%), Gaps = 18/787 (2%)
Query: 3 EQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWAR 62
+Q GPG + G G A G GP A + AG A + QY++PGILH++QHEWAR
Sbjct: 20 QQQGPGGNLGLSPGGNGAAGGGGPPA-SEGAGPAAGPELSRPQQYTIPGILHYIQHEWAR 78
Query: 63 FEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG 122
FE+ERA WEVERAELQA+IAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG
Sbjct: 79 FEMERAHWEVERAELQARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG 138
Query: 123 TELNQGDMKPPSYDSDEGNETEVQPQ-QNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSK 181
TELNQGD+K P+++S+E +TE QNSQL WKQGRQLLRQYLQEVGYTDTILDV+S+
Sbjct: 139 TELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLRQYLQEVGYTDTILDVRSQ 198
Query: 182 RVRALLGFS-SDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESA 240
RVR+LLG S S+ + KN + ++NG E+ ++ I +S S VL+ F FLE+A
Sbjct: 199 RVRSLLGLSNSEPNGSVETKNLEQILNGGESPKQKGQEIKRS----SGDVLETFNFLENA 254
Query: 241 AADFSDEDEDDDV-----DGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSE 295
D SDEDE++D+ +G++K ++ I + D +D DT+EALKEFDFLVT+E
Sbjct: 255 --DDSDEDEENDMIEGIPEGKDKHRMNKHKIGNEGLAADLTDDPDTEEALKEFDFLVTAE 312
Query: 296 EGDN--ESRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSK 353
+G+ E+RS+GDGT+W+K+D E W+VDQG+I+KLKEQYKKERKGKKGVKR NR+K
Sbjct: 313 DGEGAGEARSSGDGTEWDKDDLSPTAEVWDVDQGLISKLKEQYKKERKGKKGVKRANRTK 372
Query: 354 LQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGA 413
L DM+A+L D DELP + + + SR +S+R+ +HE RA+E E +TFP GKSFIMG+
Sbjct: 373 LYDMIADLGD-DELPHIPSGIINQSRSASTRMTDHEGARAEEAEPITFPSGGGKSFIMGS 431
Query: 414 DEALESELGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHP 473
D+ L S LGLG+LA LTV N+AD +YD+ NKDA RKTWNPK+TLRSHFDG+RALAFHP
Sbjct: 432 DDVLLSVLGLGDLADLTVTNDAD-YSYDLPANKDAFRKTWNPKYTLRSHFDGVRALAFHP 490
Query: 474 IEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYS 533
+EPVL+TASEDHTLK+WNLQKT PAKKS SLDVEPIYTFRAH GPVL + +SSNGEQC+S
Sbjct: 491 VEPVLVTASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFS 550
Query: 534 GGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTL 593
GG D IQ WN +P++DPYD+Y+P+VL G L+GHTDAVWGLAYS +LLSCSADGT+
Sbjct: 551 GGIDATIQWWNMPSPSVDPYDTYEPNVLAGTLVGHTDAVWGLAYSGIKNQLLSCSADGTV 610
Query: 594 RLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTL 653
RLWN E P + +N K+ GIP SVD + DP+HMV SF+ G I+++ET Q ++ L
Sbjct: 611 RLWNPQEKLPCICTYNGDKKHGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVIL 670
Query: 654 ESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLA 713
S VD+ S+ INRV+SHPTLP++ITAHEDRHIKF+DN TGK+IHSMVAHL+AVTSLA
Sbjct: 671 SSQVDSGLQSNNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLA 730
Query: 714 VDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGAD 773
VDPNG+YLMSGSHDCSIRLWNL+SKTC+QE TAHRKK +ESI+DVAFH SK YIASAGAD
Sbjct: 731 VDPNGIYLMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYIASAGAD 790
Query: 774 ALAKVFV 780
ALAKVFV
Sbjct: 791 ALAKVFV 797
>gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens]
Length = 713
Score = 783 bits (2021), Expect = 0.0
Identities = 422/780 (54%), Positives = 519/780 (66%), Gaps = 88/780 (11%)
Query: 3 EQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWAR 62
+Q GPG + G G A G GP A + AG A + QY++PGILH++QHEWAR
Sbjct: 20 QQQGPGGNLGLSPGGNGAAGGGGPPA-SEGAGPAAGPELSRPQQYTIPGILHYIQHEWAR 78
Query: 63 FEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG 122
FE+ERA WEVERAELQA+IAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG
Sbjct: 79 FEMERAHWEVERAELQARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYG 138
Query: 123 TELNQGDMKPPSYDSDEGNETEVQPQ-QNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSK 181
TELNQGD+K P+++S+E +TE QNSQL WKQGRQLLRQYLQEVGYT
Sbjct: 139 TELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLRQYLQEVGYT--------- 189
Query: 182 RVRALLGFSSDVTDREDDKNQDSVVNGTEAEVKETAMIAKSELTDSASVLDNFKFLESAA 241
D++++ V+ ++ SE S + + L
Sbjct: 190 ---------------------DTILDVRSQRVRSLLGLSNSEPNGSVETKNLEQILNGG- 227
Query: 242 ADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFDFLVTSEEGDNES 301
E G+E R + + L+ F+FL +++ D +
Sbjct: 228 -------ESPKQKGQEIK-------------------RSSGDVLETFNFLENADDSDED- 260
Query: 302 RSAGDGTDWEKEDQCL-MPEAWNVDQGVITKLKEQYKKERKGKKGVKRPNRSKLQDMLAN 360
E+ D +PE K K + K + G +G+ + + D
Sbjct: 261 ---------EENDMIEGIPEG---------KDKHRMNKHKIGNEGLAA-DLTDDPDTEEA 301
Query: 361 LRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGADEALESE 420
L++ D L + + G+ SS + + E +TFP GKSFIMG+D+ L S
Sbjct: 302 LKEFDFLVTAEDGEGAGEARSSG-------DGTEWAEPITFPSGGGKSFIMGSDDVLLSV 354
Query: 421 LGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRALAFHPIEPVLIT 480
LGLG+LA LTV N+AD +YD+ NKDA RKTWNPK+TLRSHFDG+RALAFHP+EPVL+T
Sbjct: 355 LGLGDLADLTVTNDAD-YSYDLPANKDAFRKTWNPKYTLRSHFDGVRALAFHPVEPVLVT 413
Query: 481 ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLI 540
ASEDHTLK+WNLQKT PAKKS SLDVEPIYTFRAH GPVL + +SSNGEQC+SGG D I
Sbjct: 414 ASEDHTLKLWNLQKTVPAKKSASLDVEPIYTFRAHIGPVLSLAISSNGEQCFSGGIDATI 473
Query: 541 QGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE 600
Q WN +P++DPYD+Y+P+VL G L+GHTDAVWGLAYS +LLSCSADGT+RLWN E
Sbjct: 474 QWWNMPSPSVDPYDTYEPNVLAGTLVGHTDAVWGLAYSGIKNQLLSCSADGTVRLWNPQE 533
Query: 601 VAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTT 660
P + +N K+ GIP SVD + DP+HMV SF+ G I+++ET Q ++ L S VD+
Sbjct: 534 KLPCICTYNGDKKHGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVILSSQVDSG 593
Query: 661 ANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLY 720
S+ INRV+SHPTLP++ITAHEDRHIKF+DN TGK+IHSMVAHL+AVTSLAVDPNG+Y
Sbjct: 594 LQSNNHINRVVSHPTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIY 653
Query: 721 LMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV 780
LMSGSHDCSIRLWNL+SKTC+QE TAHRKK +ESI+DVAFH SK YIASAGADALAKVFV
Sbjct: 654 LMSGSHDCSIRLWNLDSKTCVQEITAHRKKLDESIYDVAFHSSKAYIASAGADALAKVFV 713
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 707 bits (1826), Expect = 0.0
Identities = 397/795 (49%), Positives = 502/795 (63%), Gaps = 77/795 (9%)
Query: 5 AGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFE 64
AGPG + P + A G GP + G G+ A SLPGILHF+QHEWARFE
Sbjct: 24 AGPGP--TGAAPVSAPAPGPGPAGKGGGGG-GSPGPTAGPEPLSLPGILHFIQHEWARFE 80
Query: 65 VERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTE 124
E+A+WE ERAELQAQ+AFLQGERKGQENLK DLVRRIKMLEYALKQERAKYHKLK+GT+
Sbjct: 81 AEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTD 140
Query: 125 LNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVR 184
LNQG+ K + E +NS L+WK+GRQLLRQYL+EVGYTDTILD++SKRVR
Sbjct: 141 LNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVR 200
Query: 185 ALLGFSSDVTDREDDKN---------------QDSVVNGTEAEVKETAMIAKSELTDSAS 229
+LLG S ++ + + +V E ++K A + S
Sbjct: 201 SLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGS 260
Query: 230 VLDNFKFLESAAADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFD 289
VL FL++ + SDED++ D +K + + + D E+ D+++A+ EFD
Sbjct: 261 VLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD 320
Query: 290 FLVTSEEGD---NESRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGV 346
FL + E+G+ + R DG+ E E +
Sbjct: 321 FLGSGEDGEGAPDPRRCTVDGSPHELESR------------------------------- 349
Query: 347 KRPNRSKLQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSG 406
R KLQ +LA+LRDVD LP P V P P + + HE + S
Sbjct: 350 ----RVKLQGILADLRDVDGLP---PKVTGPP-PGTPQPRPHEGSFG----------FSS 391
Query: 407 KSFIMGADEALESELGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGI 466
FIM D E+ LG+LA LTV N+ D L+ D++++KDA +KTWNPKFTLRSH+DGI
Sbjct: 392 DVFIM--DTIGGGEVSLGDLADLTVTNDND-LSCDLSDSKDAFKKTWNPKFTLRSHYDGI 448
Query: 467 RALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSS 526
R+LAFH + L+TASED TLK+WNLQK AKK+ +LDVEPI+ FRAH+GPVL V M S
Sbjct: 449 RSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGS 508
Query: 527 NGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLS 586
N E CYSGG D I W + ++DPYD YDPSVL L GH DAVWGLA+S QRL S
Sbjct: 509 NSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLAS 568
Query: 587 CSADGTLRLWNTTEVAPA-LSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNME 645
CSADGT+R+W+ + +PA L F E G+P SV S++P+H+VASF G T +++ME
Sbjct: 569 CSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDME 628
Query: 646 TQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAH 705
+LTLES ++ QIN+V+SHP P++ITAH+DR I+F DN TGK +HSMVAH
Sbjct: 629 VGSALLTLESR---GSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAH 685
Query: 706 LEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKC 765
L+AVT LAVDPNG +LMSGSHDCS+RLW+L++KTC+QE TAHRKK EE+IH VA HPSK
Sbjct: 686 LDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKA 745
Query: 766 YIASAGADALAKVFV 780
IASAGADALAKVFV
Sbjct: 746 LIASAGADALAKVFV 760
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 707 bits (1826), Expect = 0.0
Identities = 394/795 (49%), Positives = 499/795 (62%), Gaps = 84/795 (10%)
Query: 5 AGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFE 64
AGPG + P + A G GP + G G+ A SLPGILHF+QHEWARFE
Sbjct: 24 AGPGP--TGAAPVSAPAPGPGPAGKGGGGG-GSPGPTAGPEPLSLPGILHFIQHEWARFE 80
Query: 65 VERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTE 124
E+A+WE ERAELQAQ+AFLQGERKGQENLK DLVRRIKMLEYALKQERAKYHKLK+GT+
Sbjct: 81 AEKARWEAERAELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTD 140
Query: 125 LNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVR 184
LNQG+ K + E +NS L+WK+GRQLLRQYL+EVGYTDTILD++SKRVR
Sbjct: 141 LNQGEKKADVSEQVSNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVR 200
Query: 185 ALLGFSSDVTDREDDKN---------------QDSVVNGTEAEVKETAMIAKSELTDSAS 229
+LLG S ++ + + +V E ++K A + S
Sbjct: 201 SLLGRSLELNGAVEPSEGAPRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGS 260
Query: 230 VLDNFKFLESAAADFSDEDEDDDVDGREKSVIDTSTIVRKKALPDSGEDRDTKEALKEFD 289
VL FL++ + SDED++ D +K + + + D E+ D+++A+ EFD
Sbjct: 261 VLGQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFD 320
Query: 290 FLVTSEEGD---NESRSAGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKGKKGV 346
FL + E+G+ + R DG+ E E +
Sbjct: 321 FLGSGEDGEGAPDPRRCTVDGSPHELESR------------------------------- 349
Query: 347 KRPNRSKLQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSG 406
R KLQ +LA+LRDVD LP P V P + P ++
Sbjct: 350 ----RVKLQGILADLRDVDGLP---PKVTGPPPGTPQPRPHEDV---------------- 386
Query: 407 KSFIMGADEALESELGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKFTLRSHFDGI 466
FIM D E+ LG+LA LTV N+ D L+ D++++KDA +KTWNPKFTLRSH+DGI
Sbjct: 387 --FIM--DTIGGGEVSLGDLADLTVTNDND-LSCDLSDSKDAFKKTWNPKFTLRSHYDGI 441
Query: 467 RALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSS 526
R+LAFH + L+TASED TLK+WNLQK AKK+ +LDVEPI+ FRAH+GPVL V M S
Sbjct: 442 RSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGS 501
Query: 527 NGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLS 586
N E CYSGG D I W + ++DPYD YDPSVL L GH DAVWGLA+S QRL S
Sbjct: 502 NSEYCYSGGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLAS 561
Query: 587 CSADGTLRLWNTTEVAPA-LSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNME 645
CSADGT+R+W+ + +PA L F E G+P SV S++P+H+VASF G T +++ME
Sbjct: 562 CSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDME 621
Query: 646 TQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAH 705
+LTLES ++ QIN+V+SHP P++ITAH+DR I+F DN TGK +HSMVAH
Sbjct: 622 VGSALLTLESR---GSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAH 678
Query: 706 LEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKC 765
L+AVT LAVDPNG +LMSGSHDCS+RLW+L++KTC+QE TAHRKK EE+IH VA HPSK
Sbjct: 679 LDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKA 738
Query: 766 YIASAGADALAKVFV 780
IASAGADALAKVFV
Sbjct: 739 LIASAGADALAKVFV 753
>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 119 bits (299), Expect = 8e-27
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 60 WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119
W EV+ AQ + +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 10 WETGEVQ-AQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
Query: 120 KYGTELNQGDMKPPSYDSD 138
KYG ELNQGDMKPPSYDSD
Sbjct: 69 KYGRELNQGDMKPPSYDSD 87
>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 119 bits (299), Expect = 8e-27
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 60 WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119
W EV+ AQ + +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 10 WETGEVQ-AQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
Query: 120 KYGTELNQGDMKPPSYDSD 138
KYG ELNQGDMKPPSYDSD
Sbjct: 69 KYGRELNQGDMKPPSYDSD 87
>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 117 bits (293), Expect = 4e-26
Identities = 60/79 (75%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 60 WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119
W EV+ AQ + +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 10 WETGEVQ-AQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
Query: 120 KYGTELNQGDMKPPSYDSD 138
KYG ELNQGDMKPP YDSD
Sbjct: 69 KYGRELNQGDMKPPIYDSD 87
>gi|115298668 WD repeat domain 57 (U5 snRNP specific) [Homo sapiens]
Length = 357
Score = 84.0 bits (206), Expect = 5e-16
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 29/278 (10%)
Query: 508 PIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLG 567
PI H+G V C NG S G D LI WN D+Y L G
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD----CDNY------ATLKG 107
Query: 568 HTDAVWGLAYSAAHQRLLSCSADGTLRLWN--TTEVAPALSVFNDTKELGIPASVDLVSS 625
H+ AV L Y+ L S S D T+ +W+ T E L PA
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPAR-----R 162
Query: 626 DPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHED 685
P + G ++++ + I T ++ Q+ V + T I+ D
Sbjct: 163 GPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTY--------QVLAVTFNDTSDQIISGGID 214
Query: 686 RHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLE----SKTCI 741
IK +D KL ++M H ++VT L++ G YL+S + D ++R+W++ + C+
Sbjct: 215 NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCV 274
Query: 742 QEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
+ F + FE+++ ++ P IA+ AD V+
Sbjct: 275 KIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW 312
Score = 44.3 bits (103), Expect = 4e-04
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 457 FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHK 516
+T+R H D + L+ L++ + D+T+++W+++ AP ++ + ++ F +
Sbjct: 229 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN- 287
Query: 517 GPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLA 576
+L S +G + +G D + W+TT+ I L GH ++ +A
Sbjct: 288 --LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI-----------LYKLPGHAGSINEVA 334
Query: 577 YSAAHQRLLSCSADGTL 593
+ ++S S+D L
Sbjct: 335 FHPDEPIIISASSDKRL 351
Score = 35.8 bits (81), Expect = 0.16
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 457 FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQ 493
+ L H I +AFHP EP++I+AS D L M +Q
Sbjct: 321 YKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
>gi|239787760 WD repeat domain 51A isoform 2 [Homo sapiens]
Length = 359
Score = 82.8 bits (203), Expect = 1e-15
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 30/283 (10%)
Query: 496 APAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDS 555
AP + SL+ F+ H+ V CV S N +Q SG D + W+
Sbjct: 3 APCAEDPSLERH----FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMK--------- 49
Query: 556 YDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELG 615
P GH DAV + +S + L S S D T+R+W V +VF
Sbjct: 50 --PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFR--AHTA 104
Query: 616 IPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPT 675
SV S S + AS K ++ Q+ + +L +++ + P
Sbjct: 105 TVRSVHFCSDGQSFVTASDDKT-VKVWATHRQKFLFSLSQHINWVRCAKFS-------PD 156
Query: 676 LPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNL 735
+ ++A +D+ +K +D ++ + +HS H VT + P+G + + D ++++W++
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 736 ESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKV 778
+ +Q + H +++ ++FHPS Y+ +A +D+ K+
Sbjct: 217 RTHRLLQHYQLH----SAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 68.9 bits (167), Expect = 2e-11
Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 45/324 (13%)
Query: 460 RSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPV 519
+ H D + + F L + S D L +W+++ + A Y F HK V
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRA-----------YRFTGHKDAV 64
Query: 520 LCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSA 579
CV S +G SG D ++ W PN+ + +V R HT V + + +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWV---PNVKG----ESTVFRA----HTATVRSVHFCS 113
Query: 580 AHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYT 639
Q ++ S D T+++W T S+ + A FS
Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWV---------------RCAKFSPDGR 158
Query: 640 SIFNMETQQRILTLESNVDTTANSSCQ----INRVISHPTLPISITAHEDRHIKFYDNNT 695
I + + + + + +S C+ + V HP+ A D +K +D T
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 696 GKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESI 755
+L+ H AV L+ P+G YL++ S D ++++ +L + H +
Sbjct: 219 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH----QGPA 274
Query: 756 HDVAFHPSKCYIASAGADALAKVF 779
VAF + Y AS G+D V+
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298
Score = 68.2 bits (165), Expect = 3e-11
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 557 DPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGI 616
DPS+ R GH DAV + +S ++L S S D L +W+ + P + T G
Sbjct: 8 DPSLERH-FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWH---MKPQSRAYRFT---GH 60
Query: 617 PASVDLVSSDPS-HMVASFSKGYTS---IFNMETQQRILTLESNVDTTANSSCQINRVIS 672
+V V+ PS H++AS S+ T + N++ + + + + + C +
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQSF- 118
Query: 673 HPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRL 732
+TA +D+ +K + + K + S+ H+ V P+G ++S S D +++L
Sbjct: 119 -------VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 733 WNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
W+ S+ C+ + H + V FHPS IA+AG D KV+
Sbjct: 172 WDKSSRECVHSYCEH----GGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 62.8 bits (151), Expect = 1e-09
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 38/296 (12%)
Query: 443 ANNKDALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAP 497
+ + D+ W+ K + H D + + F P +L + S D T+++W P
Sbjct: 36 SGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-----VP 90
Query: 498 AKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYD 557
K S FRAH V V S+G+ + D ++ W T
Sbjct: 91 NVKGEST------VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF------- 137
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIP 617
L H + V +S + ++S S D T++LW+ + V + + G
Sbjct: 138 ----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE---CVHSYCEHGGFV 190
Query: 618 ASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLP 677
VD S + A+ ++++ T + + + + S +N + HP+
Sbjct: 191 TYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLH-------SAAVNGLSFHPSGN 242
Query: 678 ISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLW 733
ITA D +K D G+L++++ H T++A G Y SG D + +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 55.8 bits (133), Expect = 1e-07
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 462 HFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLC 521
H + L+FHP LITAS D TLK+ +L ++ +YT H+GP
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDL-----------MEGRLLYTLHGHQGPATT 276
Query: 522 VVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAH 581
V S GE SGG+D + W + N D D + + + P ++ L S
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKS---NFDIVDHGEVTKVPRPPATLASSMGNLTVSILE 333
Query: 582 QRL 584
QRL
Sbjct: 334 QRL 336
>gi|239787754 WD repeat domain 51A isoform 1 [Homo sapiens]
Length = 407
Score = 82.8 bits (203), Expect = 1e-15
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 30/283 (10%)
Query: 496 APAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDS 555
AP + SL+ F+ H+ V CV S N +Q SG D + W+
Sbjct: 3 APCAEDPSLERH----FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMK--------- 49
Query: 556 YDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELG 615
P GH DAV + +S + L S S D T+R+W V +VF
Sbjct: 50 --PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFR--AHTA 104
Query: 616 IPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPT 675
SV S S + AS K ++ Q+ + +L +++ + P
Sbjct: 105 TVRSVHFCSDGQSFVTASDDKT-VKVWATHRQKFLFSLSQHINWVRCAKFS-------PD 156
Query: 676 LPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNL 735
+ ++A +D+ +K +D ++ + +HS H VT + P+G + + D ++++W++
Sbjct: 157 GRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 216
Query: 736 ESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKV 778
+ +Q + H +++ ++FHPS Y+ +A +D+ K+
Sbjct: 217 RTHRLLQHYQLH----SAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 68.9 bits (167), Expect = 2e-11
Identities = 72/324 (22%), Positives = 124/324 (38%), Gaps = 45/324 (13%)
Query: 460 RSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPV 519
+ H D + + F L + S D L +W+++ + A Y F HK V
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRA-----------YRFTGHKDAV 64
Query: 520 LCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSA 579
CV S +G SG D ++ W PN+ + +V R HT V + + +
Sbjct: 65 TCVNFSPSGHLLASGSRDKTVRIWV---PNVKG----ESTVFRA----HTATVRSVHFCS 113
Query: 580 AHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYT 639
Q ++ S D T+++W T S+ + A FS
Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWV---------------RCAKFSPDGR 158
Query: 640 SIFNMETQQRILTLESNVDTTANSSCQ----INRVISHPTLPISITAHEDRHIKFYDNNT 695
I + + + + + +S C+ + V HP+ A D +K +D T
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 696 GKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESI 755
+L+ H AV L+ P+G YL++ S D ++++ +L + H +
Sbjct: 219 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGH----QGPA 274
Query: 756 HDVAFHPSKCYIASAGADALAKVF 779
VAF + Y AS G+D V+
Sbjct: 275 TTVAFSRTGEYFASGGSDEQVMVW 298
Score = 68.2 bits (165), Expect = 3e-11
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 557 DPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGI 616
DPS+ R GH DAV + +S ++L S S D L +W+ + P + T G
Sbjct: 8 DPSLERH-FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWH---MKPQSRAYRFT---GH 60
Query: 617 PASVDLVSSDPS-HMVASFSKGYTS---IFNMETQQRILTLESNVDTTANSSCQINRVIS 672
+V V+ PS H++AS S+ T + N++ + + + + + C +
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHF-CSDGQSF- 118
Query: 673 HPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRL 732
+TA +D+ +K + + K + S+ H+ V P+G ++S S D +++L
Sbjct: 119 -------VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKL 171
Query: 733 WNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
W+ S+ C+ + H + V FHPS IA+AG D KV+
Sbjct: 172 WDKSSRECVHSYCEH----GGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 62.8 bits (151), Expect = 1e-09
Identities = 64/296 (21%), Positives = 115/296 (38%), Gaps = 38/296 (12%)
Query: 443 ANNKDALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAP 497
+ + D+ W+ K + H D + + F P +L + S D T+++W P
Sbjct: 36 SGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW-----VP 90
Query: 498 AKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYD 557
K S FRAH V V S+G+ + D ++ W T
Sbjct: 91 NVKGEST------VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF------- 137
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIP 617
L H + V +S + ++S S D T++LW+ + V + + G
Sbjct: 138 ----LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE---CVHSYCEHGGFV 190
Query: 618 ASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLP 677
VD S + A+ ++++ T + + + + S +N + HP+
Sbjct: 191 TYVDFHPSGTC-IAAAGMDNTVKVWDVRTHRLLQHYQLH-------SAAVNGLSFHPSGN 242
Query: 678 ISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLW 733
ITA D +K D G+L++++ H T++A G Y SG D + +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 53.1 bits (126), Expect = 9e-07
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 462 HFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLC 521
H + L+FHP LITAS D TLK+ +L ++ +YT H+GP
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDL-----------MEGRLLYTLHGHQGPATT 276
Query: 522 VVMSSNGEQCYSGGTDGLIQGWNTTNPNID 551
V S GE SGG+D + W + +D
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKSNFDIVD 306
>gi|148536855 coatomer protein complex, subunit alpha isoform 1
[Homo sapiens]
Length = 1233
Score = 80.1 bits (196), Expect = 7e-15
Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 56/338 (16%)
Query: 466 IRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMS 525
++ L+FHP P ++T+ + +++W+ + K F H GPV +
Sbjct: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-----------FDEHDGPVRGIDFH 60
Query: 526 SNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLL 585
SGG D I+ WN Y LLGH D + + + +L
Sbjct: 61 KQQPLFVSGGDDYKIKVWN-----------YKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
Query: 586 SCSADGTLRLWNTTEVAPALSV-----------FNDTKELGIPASVDLVSSDPSHMVASF 634
S S D T+R+WN + F+ T++L + AS+D + ++
Sbjct: 110 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLD--QTVRVWDISGL 167
Query: 635 SKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVIS-----------HPTLPISITAH 683
K S +E+ R +T VD + + V+ HPT+P+ ++
Sbjct: 168 RKKNLSPGAVESDVRGIT---GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA 224
Query: 684 EDRHIKFYDNNTGKL--IHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCI 741
+DR +K + N K + + H V+ P ++S S D SIR+W++ +T +
Sbjct: 225 DDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGV 284
Query: 742 QEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
Q F +F +A HP+ + +AG D VF
Sbjct: 285 QTFRRDHDRF----WVLAAHPN-LNLFAAGHDGGMIVF 317
Score = 50.1 bits (118), Expect = 8e-06
Identities = 65/317 (20%), Positives = 111/317 (35%), Gaps = 85/317 (26%)
Query: 442 IANNKDALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTA 496
++ D K WN K FTL H D IR FH P +++AS+D T+++WN Q
Sbjct: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 126
Query: 497 PAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTT---NPNIDP- 552
+ H V+C + S D ++ W+ + N+ P
Sbjct: 127 -----------CVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Query: 553 -YDSYDPSVLRGPLLGHTDAV---------WGLAYSAAHQR---LLSCSADGTLRLWNTT 599
+S + L G TDAV G+ ++A H ++S + D +++W
Sbjct: 176 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 235
Query: 600 EVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDT 659
E SK + VDT
Sbjct: 236 E----------------------------------SKAW-----------------EVDT 244
Query: 660 TANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGL 719
++ + HP + ++ ED+ I+ +D + + + + LA PN L
Sbjct: 245 CRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPN-L 303
Query: 720 YLMSGSHDCSIRLWNLE 736
L + HD + ++ LE
Sbjct: 304 NLFAAGHDGGMIVFKLE 320
Score = 37.4 bits (85), Expect = 0.054
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 664 SCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMS 723
S ++ + HP P +T+ + I+ +D LI H V + +S
Sbjct: 9 SARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVS 68
Query: 724 GSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
G D I++WN + + C+ H + I FH +I SA D +V+
Sbjct: 69 GGDDYKIKVWNYKLRRCLFTLLGHL----DYIRTTFFHHEYPWILSASDDQTIRVW 120
>gi|148536853 coatomer protein complex, subunit alpha isoform 2
[Homo sapiens]
Length = 1224
Score = 80.1 bits (196), Expect = 7e-15
Identities = 79/338 (23%), Positives = 136/338 (40%), Gaps = 56/338 (16%)
Query: 466 IRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMS 525
++ L+FHP P ++T+ + +++W+ + K F H GPV +
Sbjct: 12 VKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDK-----------FDEHDGPVRGIDFH 60
Query: 526 SNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLL 585
SGG D I+ WN Y LLGH D + + + +L
Sbjct: 61 KQQPLFVSGGDDYKIKVWN-----------YKLRRCLFTLLGHLDYIRTTFFHHEYPWIL 109
Query: 586 SCSADGTLRLWNTTEVAPALSV-----------FNDTKELGIPASVDLVSSDPSHMVASF 634
S S D T+R+WN + F+ T++L + AS+D + ++
Sbjct: 110 SASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLD--QTVRVWDISGL 167
Query: 635 SKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVIS-----------HPTLPISITAH 683
K S +E+ R +T VD + + V+ HPT+P+ ++
Sbjct: 168 RKKNLSPGAVESDVRGIT---GVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGA 224
Query: 684 EDRHIKFYDNNTGKL--IHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCI 741
+DR +K + N K + + H V+ P ++S S D SIR+W++ +T +
Sbjct: 225 DDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGV 284
Query: 742 QEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
Q F +F +A HP+ + +AG D VF
Sbjct: 285 QTFRRDHDRF----WVLAAHPN-LNLFAAGHDGGMIVF 317
Score = 50.1 bits (118), Expect = 8e-06
Identities = 65/317 (20%), Positives = 111/317 (35%), Gaps = 85/317 (26%)
Query: 442 IANNKDALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTA 496
++ D K WN K FTL H D IR FH P +++AS+D T+++WN Q
Sbjct: 67 VSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRT 126
Query: 497 PAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTT---NPNIDP- 552
+ H V+C + S D ++ W+ + N+ P
Sbjct: 127 -----------CVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLRKKNLSPG 175
Query: 553 -YDSYDPSVLRGPLLGHTDAV---------WGLAYSAAHQR---LLSCSADGTLRLWNTT 599
+S + L G TDAV G+ ++A H ++S + D +++W
Sbjct: 176 AVESDVRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMN 235
Query: 600 EVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDT 659
E SK + VDT
Sbjct: 236 E----------------------------------SKAW-----------------EVDT 244
Query: 660 TANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGL 719
++ + HP + ++ ED+ I+ +D + + + + LA PN L
Sbjct: 245 CRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPN-L 303
Query: 720 YLMSGSHDCSIRLWNLE 736
L + HD + ++ LE
Sbjct: 304 NLFAAGHDGGMIVFKLE 320
Score = 37.4 bits (85), Expect = 0.054
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 4/116 (3%)
Query: 664 SCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMS 723
S ++ + HP P +T+ + I+ +D LI H V + +S
Sbjct: 9 SARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPLFVS 68
Query: 724 GSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
G D I++WN + + C+ H + I FH +I SA D +V+
Sbjct: 69 GGDDYKIKVWNYKLRRCLFTLLGHL----DYIRTTFFHHEYPWILSASDDQTIRVW 120
>gi|4557741 platelet-activating factor acetylhydrolase, isoform Ib,
alpha subunit [Homo sapiens]
Length = 410
Score = 79.0 bits (193), Expect = 2e-14
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 51/348 (14%)
Query: 451 KTWNP----KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDV 506
K W P K+ L H + + FHP+ V+++ASED T+K+W+ + + D
Sbjct: 92 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE---------TGDF 142
Query: 507 EPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLL 566
E T + H V + +G+ S D I+ W D +R +
Sbjct: 143 E--RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW----------DFQGFECIR-TMH 189
Query: 567 GHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLV-SS 625
GH V +A ++S S D T+++W + + F +E V +V +
Sbjct: 190 GHDHNVSSVAIMPNGDHIVSASRDKTIKMWE-VQTGYCVKTFTGHREW-----VRMVRPN 243
Query: 626 DPSHMVASFSKGYT----SIFNMETQQRILTLESNVDTTA----NSSCQINRVISHPTL- 676
++AS S T + E + + E V+ + +S I+ T
Sbjct: 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Query: 677 -----PISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIR 731
P ++ D+ IK +D +TG + ++V H V + G +++S + D ++R
Sbjct: 304 SGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLR 363
Query: 732 LWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
+W+ ++K C++ AH E + + FH + Y+ + D KV+
Sbjct: 364 VWDYKNKRCMKTLNAH----EHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>gi|32189425 WD repeat domain 69 [Homo sapiens]
Length = 415
Score = 79.0 bits (193), Expect = 2e-14
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 35/277 (12%)
Query: 458 TLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKG 517
T R H I L+F+P ++ T S D T K+W++Q E +YT R H
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG-----------EEVYTLRGHSA 220
Query: 518 PVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAY 577
++ + +++G++ +G D + W+ D L+GH + ++
Sbjct: 221 EIISLSFNTSGDRIITGSFDHTVVVWDA-----------DTGRKVNILIGHCAEISSASF 269
Query: 578 SAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSK- 636
+ +L+ S D T +LW+ T ++ E+ +D ++A+ S
Sbjct: 270 NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEI-----LDSCFDYTGKLIATASAD 324
Query: 637 GYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTG 696
G IF+ T++ I LE + +I+++ +P +T D+ + +D TG
Sbjct: 325 GTARIFSAATRKCIAKLEGHEG-------EISKISFNPQGNHLLTGSSDKTARIWDAQTG 377
Query: 697 KLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLW 733
+ + + H + + S A + G +++GS D + R+W
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 67.4 bits (163), Expect = 5e-11
Identities = 65/305 (21%), Positives = 138/305 (45%), Gaps = 31/305 (10%)
Query: 478 LITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTD 537
L+TAS +K+ + ++++ +AH P+ V ++ +G +G D
Sbjct: 54 LLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYD 113
Query: 538 GLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAH-QRLLSCSADGTLRLW 596
+ W+T + L GH + V+ +A++ + ++ + S D T +LW
Sbjct: 114 RTCKLWDTASGEE-----------LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW 162
Query: 597 NTTEVAPALSVFNDTKELGIPASVDLVSSDP-SHMVASFSKGYTS-IFNMETQQRILTLE 654
+ E F G A + +S +P S +VA+ S T+ +++++ + + TL
Sbjct: 163 SV-ETGKCYHTFR-----GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR 216
Query: 655 SNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAV 714
+ S +I + + + IT D + +D +TG+ ++ ++ H ++S +
Sbjct: 217 GH-------SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASF 269
Query: 715 DPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADA 774
+ + +++GS D + +LW+ + C+ T H ++ I D F + IA+A AD
Sbjct: 270 NWDCSLILTGSMDKTCKLWDATNGKCVATLTGH----DDEILDSCFDYTGKLIATASADG 325
Query: 775 LAKVF 779
A++F
Sbjct: 326 TARIF 330
Score = 66.6 bits (161), Expect = 8e-11
Identities = 62/323 (19%), Positives = 131/323 (40%), Gaps = 38/323 (11%)
Query: 458 TLRSHFDGIRALAFH-PIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHK 516
TL H + + A+AF+ P + T S D T K+W+++ + +TFR H
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETG-----------KCYHTFRGHT 177
Query: 517 GPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLA 576
++C+ + +G D + W+ N + Y L GH+ + L+
Sbjct: 178 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE----EVYT-------LRGHSAEIISLS 226
Query: 577 YSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSK 636
++ + R+++ S D T+ +W+ + E+ + + D S ++
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSAS----FNWDCSLILTGSMD 282
Query: 637 GYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTG 696
+++ + + TL + D +S T + TA D + + T
Sbjct: 283 KTCKLWDATNGKCVATLTGHDDEILDSCFDY-------TGKLIATASADGTARIFSAATR 335
Query: 697 KLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIH 756
K I + H ++ ++ +P G +L++GS D + R+W+ ++ C+Q H + I
Sbjct: 336 KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGH----TDEIF 391
Query: 757 DVAFHPSKCYIASAGADALAKVF 779
AF+ + + D +++
Sbjct: 392 SCAFNYKGNIVITGSKDNTCRIW 414
Score = 59.3 bits (142), Expect = 1e-08
Identities = 72/398 (18%), Positives = 157/398 (39%), Gaps = 51/398 (12%)
Query: 387 EHEINRADEVEALTFPPSSGKSFIMGADEALESELGLGELAGLTVANEADSLTYDIANNK 446
+H + ++ L PS+ S AL E+ E L A+ + + I +
Sbjct: 21 KHGELKTKSIDLLDLGPSTDVS-------ALVEEIQKAE--PLLTASRTEQVKLLIQRLQ 71
Query: 447 DALRKTWNPKF----TLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKST 502
+ L + N F L++H + +A + IT S D T K+W+
Sbjct: 72 EKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWD----------- 120
Query: 503 SLDVEPIYTFRAHKGPVLCVVMSS-NGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVL 561
+ E + T H+ V + ++ G++ +G D + W S +
Sbjct: 121 TASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLW-----------SVETGKC 169
Query: 562 RGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVD 621
GHT + L+++ + + S D T +LW+ ++ + E+ S+
Sbjct: 170 YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEI---ISLS 226
Query: 622 LVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISIT 681
+S + SF +++ +T +++ L + +++S + + +T
Sbjct: 227 FNTSGDRIITGSFDHTVV-VWDADTGRKVNILIGHCAEISSASFNWD-------CSLILT 278
Query: 682 AHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCI 741
D+ K +D GK + ++ H + + D G + + S D + R+++ ++ CI
Sbjct: 279 GSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCI 338
Query: 742 QEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
+ H E I ++F+P ++ + +D A+++
Sbjct: 339 AKLEGH----EGEISKISFNPQGNHLLTGSSDKTARIW 372
Score = 43.1 bits (100), Expect = 0.001
Identities = 50/229 (21%), Positives = 90/229 (39%), Gaps = 37/229 (16%)
Query: 447 DALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKS 501
D K W+ + +TLR H I +L+F+ +IT S DHT+ +W+ A +
Sbjct: 198 DTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD----ADTGRK 253
Query: 502 TSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVL 561
++ + H + + + +G D + W+ TN
Sbjct: 254 VNILI-------GHCAEISSASFNWDCSLILTGSMDKTCKLWDATN-----------GKC 295
Query: 562 RGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVD 621
L GH D + + + + + SADGT R+++ A + K G +
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFS------AATRKCIAKLEGHEGEIS 349
Query: 622 LVSSDP--SHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQIN 668
+S +P +H++ S I++ +T Q + LE + D SC N
Sbjct: 350 KISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEI--FSCAFN 396
>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
sapiens]
Length = 514
Score = 76.3 bits (186), Expect = 1e-13
Identities = 83/378 (21%), Positives = 146/378 (38%), Gaps = 61/378 (16%)
Query: 428 GLTVANEADSLTYDIANNKDALRKTW-------NPKFTLRSHFDGIRALAFHPIEPVLIT 480
G AN ++ + IANN + + N LR H + A++P+ +L +
Sbjct: 127 GENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPVSDLLAS 186
Query: 481 ASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKG--------PVLCVVMSSNGEQCY 532
S D T ++WNL ++ STS + + +G V + +S G
Sbjct: 187 GSGDSTARIWNL-----SENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLA 241
Query: 533 SGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGT 592
+G DG + W T + N L L H ++ L ++ +LS D T
Sbjct: 242 TGSYDGFARIW-TKDGN-----------LASTLGQHKGPIFALKWNKKGNFILSAGVDKT 289
Query: 593 LRLWNT-TEVAPALSVFNDTKELGIP-ASVDLVSSDPSHMVASFSKGYTSIFNMETQQRI 650
+W+ T A F+ L + S + +S + M K
Sbjct: 290 TIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCK-------------- 335
Query: 651 LTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVT 710
L + + T + ++N + PT + + +D +K + +H + AH + +
Sbjct: 336 LGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIY 395
Query: 711 SLAVDPNG---------LYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFH 761
++ P G L L S S D ++RLW+++ CI T H +E ++ VAF
Sbjct: 396 TIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKH----QEPVYSVAFS 451
Query: 762 PSKCYIASAGADALAKVF 779
P Y+AS D ++
Sbjct: 452 PDGRYLASGSFDKCVHIW 469
>gi|5174447 guanine nucleotide binding protein (G protein), beta
polypeptide 2-like 1 [Homo sapiens]
Length = 317
Score = 75.9 bits (185), Expect = 1e-13
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 28/287 (9%)
Query: 458 TLRSHFDGIRALAFHPIEP-VLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHK 516
TL+ H + +A P P ++++AS D T+ MW L + T+ + P R H
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKL-----TRDETNYGI-PQRALRGHS 63
Query: 517 GPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLA 576
V VV+SS+G+ SG DG ++ W+ T +GHT V +A
Sbjct: 64 HFVSDVVISSDGQFALSGSWDGTLRLWDLTT-----------GTTTRRFVGHTKDVLSVA 112
Query: 577 YSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSK 636
+S+ +++++S S D T++LWNT V E SS+P + + K
Sbjct: 113 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 637 GYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTG 696
++N+ L++N + +N V P + + +D +D N G
Sbjct: 173 -LVKVWNLAN----CKLKTN---HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
Query: 697 KLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQE 743
K ++++ + + +L PN +L + + SI++W+LE K + E
Sbjct: 225 KHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDE 269
Score = 46.6 bits (109), Expect = 9e-05
Identities = 54/222 (24%), Positives = 82/222 (36%), Gaps = 54/222 (24%)
Query: 561 LRGPLLGHTDAVWGLAYSAAH-QRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPAS 619
LRG L GH V +A + +LS S D T+ +W T D GIP
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTR---------DETNYGIP-- 55
Query: 620 VDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPIS 679
QR L S+ ++ V+ +
Sbjct: 56 ----------------------------QRALRGHSHF---------VSDVVISSDGQFA 78
Query: 680 ITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKT 739
++ D ++ +D TG V H + V S+A + ++SGS D +I+LWN
Sbjct: 79 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG-- 136
Query: 740 CIQEFTAHRKKFEESIHDVAFHP--SKCYIASAGADALAKVF 779
+ ++T + E + V F P S I S G D L KV+
Sbjct: 137 -VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>gi|4505895 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis)
[Homo sapiens]
Length = 514
Score = 73.6 bits (179), Expect = 7e-13
Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 49/338 (14%)
Query: 453 WNPKFTL----RSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEP 508
W+P + L H +R +A P +T S D T+K+W+L A K SL
Sbjct: 190 WHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDL---ASGKLKLSL---- 242
Query: 509 IYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTT-NPNIDPYDSYDPSVLRGPLLG 567
H V V++S+ +S G D ++ W+ N I Y G
Sbjct: 243 ----TGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH------------G 286
Query: 568 HTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDP 627
H AV+GL L++CS D T R+W+ A ++ T + A+V +++P
Sbjct: 287 HLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAV---ATVRCQAAEP 343
Query: 628 SHMVASFSKGYTSIFNMETQQRILTLESNVD--TTANSSCQINRVISHPTLPISITAHED 685
+ S +T R+ L + T N + V+ HP + D
Sbjct: 344 QIITGSH----------DTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD 393
Query: 686 RHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFT 745
+IK + G I ++ H + +L V+ +G+ L+SG+ + ++ LW+ + Q
Sbjct: 394 -NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGV-LVSGADNGTMHLWDWRTGYNFQRVH 451
Query: 746 AHRK----KFEESIHDVAFHPSKCYIASAGADALAKVF 779
A + E I AF S+ + +A AD KV+
Sbjct: 452 AAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
Score = 37.4 bits (85), Expect = 0.054
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 440 YDIANNKDALRKTWNPKFT-----LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQK 494
Y + +D K W+ ++ H + L HP VL+T S D T ++W+++
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 319
Query: 495 TAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWN 544
A ++T H V V + Q +G D I+ W+
Sbjct: 320 KA-----------SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD 358
Score = 37.0 bits (84), Expect = 0.070
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 29/158 (18%)
Query: 445 NKDALRKTWNPK-----FTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAK 499
++D+ + W+ + TL H + + + EP +IT S D T+++W+L A
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL----VAG 362
Query: 500 KSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPS 559
K+ T HK V VV+ SG D NI + D S
Sbjct: 363 KTR-------VTLTNHKKSVRAVVLHPRHYTFASGSPD-----------NIKQWKFPDGS 404
Query: 560 VLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWN 597
++ L GH + L + + L+S + +GT+ LW+
Sbjct: 405 FIQN-LSGHNAIINTLTVN-SDGVLVSGADNGTMHLWD 440
>gi|26665869 WD repeat domain 51B [Homo sapiens]
Length = 478
Score = 73.6 bits (179), Expect = 7e-13
Identities = 80/329 (24%), Positives = 132/329 (40%), Gaps = 50/329 (15%)
Query: 447 DALRKTWNPKFTLRS-----HFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKS 501
D WN K R+ H D + ++ F P +L +AS D T+++W P K+
Sbjct: 39 DTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLW-----IPDKRG 93
Query: 502 TSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVL 561
+ F+AH PV V S++G+ + D I+ W+ Y L
Sbjct: 94 KFSE------FKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM----------YRQRFL 137
Query: 562 RGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVD 621
L HT V +S + ++SCS D T+++W+TT V N + +G VD
Sbjct: 138 YS-LYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ---CVNNFSDSVGFANFVD 193
Query: 622 LVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANS----SCQINRVISHPTLP 677
F+ T I + + Q + + V+ S +N + HP+
Sbjct: 194 ------------FNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGN 241
Query: 678 ISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLW--NL 735
ITA D +K D G+LI+++ H V +++ G SG D + LW N
Sbjct: 242 YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF 301
Query: 736 ESKTC--IQEFTAHRKKFEESIHDVAFHP 762
+ C + + R F+ H + +P
Sbjct: 302 DELHCKGLTKRNLKRLHFDSPPHLLDIYP 330
Score = 73.2 bits (178), Expect = 9e-13
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 28/268 (10%)
Query: 512 FRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDA 571
F+ HK + + +S NG+Q + D + WN + P +GH D
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWN-----------FKPHARAYRYVGHKDV 62
Query: 572 VWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPA-SVDLVSSDPSHM 630
V + +S L S S D T+RLW + F++ K P SVD S+D +
Sbjct: 63 VTSVQFSPHGNLLASASRDRTVRLW----IPDKRGKFSEFKAHTAPVRSVDF-SADGQFL 117
Query: 631 VASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKF 690
+ +++M Q+ + +L + + P + ++ ED+ IK
Sbjct: 118 ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFS-------PDGRLIVSCSEDKTIKI 170
Query: 691 YDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKK 750
+D + +++ + + +P+G + S D ++++W++ +Q + H
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVH--- 227
Query: 751 FEESIHDVAFHPSKCYIASAGADALAKV 778
++ ++FHPS Y+ +A +D K+
Sbjct: 228 -SGGVNCISFHPSGNYLITASSDGTLKI 254
Score = 43.5 bits (101), Expect = 8e-04
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 681 TAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTC 740
TA D + ++ + V H + VTS+ P+G L S S D ++RLW + +
Sbjct: 35 TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGK 94
Query: 741 IQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
EF AH + V F ++A+A D KV+
Sbjct: 95 FSEFKAH----TAPVRSVDFSADGQFLATASEDKSIKVW 129
Score = 41.6 bits (96), Expect = 0.003
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 705 HLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSK 764
H A+TSL + PNG L + S D + LWN + + H+ + + V F P
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHK----DVVTSVQFSPHG 72
Query: 765 CYIASAGADALAKVFV 780
+ASA D ++++
Sbjct: 73 NLLASASRDRTVRLWI 88
>gi|21071067 TBP-associated factor 5 [Homo sapiens]
Length = 800
Score = 72.4 bits (176), Expect = 2e-12
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 30/219 (13%)
Query: 440 YDIANNKDALRKTW-----NPKFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQK 494
Y ++ D + + W P H + FHP + T S D T+++W++
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDV-- 656
Query: 495 TAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYD 554
L+ + F HKGP+ + S NG +G TDG + W+ +
Sbjct: 657 ---------LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH------- 700
Query: 555 SYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKEL 614
++ G L GHTD V L +S + L S S D T+RLW+ + L + T
Sbjct: 701 ----GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTAT 756
Query: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTL 653
G ++L + ++ ++ T + ++ +R L L
Sbjct: 757 G---HINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVL 792
Score = 56.2 bits (134), Expect = 1e-07
Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 11/183 (6%)
Query: 565 LLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVS 624
L GH+ V+G ++S LLS S DGT+RLW+ + K P S
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY----KGHNYPVWDTQFS 594
Query: 625 SDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHE 684
+ V+ ++ + Q + ++ +N HP T
Sbjct: 595 PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-------ADVNCTRFHPNSNYVATGSA 647
Query: 685 DRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEF 744
DR ++ +D G + H + SL PNG +L +G+ D + LW++ + E
Sbjct: 648 DRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL 707
Query: 745 TAH 747
H
Sbjct: 708 KGH 710
Score = 52.0 bits (123), Expect = 2e-06
Identities = 81/364 (22%), Positives = 126/364 (34%), Gaps = 49/364 (13%)
Query: 377 PSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMGAD--EALESELGLGELAGLTVANE 434
P+ P +R+P E+ +D+++ + + K +G D ++ L GLT +
Sbjct: 419 PNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDV 478
Query: 435 ADSLTYDIANNKDALRKTWN--PKFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNL 492
D + D+ + W+ PK LRS + LI D L+
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPK-KLRS--------VKQASDLSLIDKESDDVLERIMD 529
Query: 493 QKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDP 552
+KTA K H GPV S + S DG ++ W
Sbjct: 530 EKTASELK----------ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLW--------- 570
Query: 553 YDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTK 612
S GH VW +S +S D RLW T P L +F
Sbjct: 571 --SLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQP-LRIF---- 623
Query: 613 ELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRIL-TLESN-VDTTANSSCQINRV 670
G A V+ P+ Y + + + R+ L N V I+ +
Sbjct: 624 -AGHLADVNCTRFHPN-------SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Query: 671 ISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSI 730
P T D + +D G ++ + H + V SL +G L SGS D ++
Sbjct: 676 TFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Query: 731 RLWN 734
RLW+
Sbjct: 736 RLWD 739
Score = 48.5 bits (114), Expect = 2e-05
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 689 KFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHR 748
+ D T + + H V + P+ YL+S S D ++RLW+L++ TC+ + H
Sbjct: 526 RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH- 584
Query: 749 KKFEESIHDVAFHPSKCYIASAGADALAKVF 779
+ D F P Y S G D +A+++
Sbjct: 585 ---NYPVWDTQFSPYGYYFVSGGHDRVARLW 612
Score = 48.5 bits (114), Expect = 2e-05
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 680 ITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKT 739
++ DR + + + + + HL V PN Y+ +GS D ++RLW++ +
Sbjct: 601 VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN 660
Query: 740 CIQEFTAHRKKFEESIHDVAFHPSKCYIASAGAD 773
C++ FT H+ IH + F P+ ++A+ D
Sbjct: 661 CVRIFTGHK----GPIHSLTFSPNGRFLATGATD 690
Score = 43.5 bits (101), Expect = 8e-04
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 680 ITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKT 739
+++ ED ++ + T + H V P G Y +SG HD RLW +
Sbjct: 559 LSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ 618
Query: 740 CIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
++ F H ++ FHP+ Y+A+ AD +++
Sbjct: 619 PLRIFAGHL----ADVNCTRFHPNSNYVATGSADRTVRLW 654
>gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 52/339 (15%)
Query: 459 LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGP 518
LR H + A++P+ +L + S D T ++WNL + + ST L + H P
Sbjct: 177 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGG-STQLVLRHCIREGGHDVP 235
Query: 519 ----VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWG 574
V + ++NG +G DG + W + L L H ++
Sbjct: 236 SNKDVTSLDWNTNGTLLATGSYDGFARIWT------------EDGNLASTLGQHKGPIFA 283
Query: 575 LAYSAAHQRLLSCSADGTLRLWNT-TEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
L ++ +LS D T +W+ T A F+ L +
Sbjct: 284 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--------------- 328
Query: 634 FSKGYTSIFNMETQQRI----LTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIK 689
+ T+ + T I L + V T + ++N + P+ + + +D +K
Sbjct: 329 --QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 386
Query: 690 FYDNNTGKLIHSMVAHLEAVTSLAVDPNG---------LYLMSGSHDCSIRLWNLESKTC 740
+ IH + AH + + ++ P G + L S S D ++RLW++E C
Sbjct: 387 IWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVC 446
Query: 741 IQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
T H +E ++ VAF P Y+AS D ++
Sbjct: 447 THTLTKH----QEPVYSVAFSPDGKYLASGSFDKCVHIW 481
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/274 (20%), Positives = 107/274 (39%), Gaps = 56/274 (20%)
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE----VAPALSVFNDTKE 613
PS L GH V+ A++ L S S D T R+WN E + L + + +E
Sbjct: 170 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 229
Query: 614 LG--IPASVDLVSSD----------------------PSHMVASFSKGYTSIFNMETQQR 649
G +P++ D+ S D ++ ++ + IF ++ ++
Sbjct: 230 GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRK 289
Query: 650 -ILTLESNVDTT-------ANSSCQINRVISHPTLPIS-------ITAHEDRHIKFYDNN 694
L + VD T + Q S P L + + D I
Sbjct: 290 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLG 349
Query: 695 TGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEES 754
+ + + H V ++ DP+G+ L S S D ++++W+++ + CI + AH K+
Sbjct: 350 CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE---- 405
Query: 755 IHDVAFHP---------SKCYIASAGADALAKVF 779
I+ + + P S +ASA D+ +++
Sbjct: 406 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 439
>gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]
Length = 526
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 52/339 (15%)
Query: 459 LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGP 518
LR H + A++P+ +L + S D T ++WNL + + ST L + H P
Sbjct: 177 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGG-STQLVLRHCIREGGHDVP 235
Query: 519 ----VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWG 574
V + ++NG +G DG + W + L L H ++
Sbjct: 236 SNKDVTSLDWNTNGTLLATGSYDGFARIWT------------EDGNLASTLGQHKGPIFA 283
Query: 575 LAYSAAHQRLLSCSADGTLRLWNT-TEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
L ++ +LS D T +W+ T A F+ L +
Sbjct: 284 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--------------- 328
Query: 634 FSKGYTSIFNMETQQRI----LTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIK 689
+ T+ + T I L + V T + ++N + P+ + + +D +K
Sbjct: 329 --QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 386
Query: 690 FYDNNTGKLIHSMVAHLEAVTSLAVDPNG---------LYLMSGSHDCSIRLWNLESKTC 740
+ IH + AH + + ++ P G + L S S D ++RLW++E C
Sbjct: 387 IWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVC 446
Query: 741 IQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
T H +E ++ VAF P Y+AS D ++
Sbjct: 447 THTLTKH----QEPVYSVAFSPDGKYLASGSFDKCVHIW 481
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/274 (20%), Positives = 107/274 (39%), Gaps = 56/274 (20%)
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE----VAPALSVFNDTKE 613
PS L GH V+ A++ L S S D T R+WN E + L + + +E
Sbjct: 170 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 229
Query: 614 LG--IPASVDLVSSD----------------------PSHMVASFSKGYTSIFNMETQQR 649
G +P++ D+ S D ++ ++ + IF ++ ++
Sbjct: 230 GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRK 289
Query: 650 -ILTLESNVDTT-------ANSSCQINRVISHPTLPIS-------ITAHEDRHIKFYDNN 694
L + VD T + Q S P L + + D I
Sbjct: 290 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLG 349
Query: 695 TGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEES 754
+ + + H V ++ DP+G+ L S S D ++++W+++ + CI + AH K+
Sbjct: 350 CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE---- 405
Query: 755 IHDVAFHP---------SKCYIASAGADALAKVF 779
I+ + + P S +ASA D+ +++
Sbjct: 406 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 439
>gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 52/339 (15%)
Query: 459 LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGP 518
LR H + A++P+ +L + S D T ++WNL + + ST L + H P
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGG-STQLVLRHCIREGGHDVP 286
Query: 519 ----VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWG 574
V + ++NG +G DG + W + L L H ++
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWT------------EDGNLASTLGQHKGPIFA 334
Query: 575 LAYSAAHQRLLSCSADGTLRLWNT-TEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
L ++ +LS D T +W+ T A F+ L +
Sbjct: 335 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--------------- 379
Query: 634 FSKGYTSIFNMETQQRI----LTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIK 689
+ T+ + T I L + V T + ++N + P+ + + +D +K
Sbjct: 380 --QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 437
Query: 690 FYDNNTGKLIHSMVAHLEAVTSLAVDPNG---------LYLMSGSHDCSIRLWNLESKTC 740
+ IH + AH + + ++ P G + L S S D ++RLW++E C
Sbjct: 438 IWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVC 497
Query: 741 IQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
T H +E ++ VAF P Y+AS D ++
Sbjct: 498 THTLTKH----QEPVYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/274 (20%), Positives = 107/274 (39%), Gaps = 56/274 (20%)
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE----VAPALSVFNDTKE 613
PS L GH V+ A++ L S S D T R+WN E + L + + +E
Sbjct: 221 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 280
Query: 614 LG--IPASVDLVSSD----------------------PSHMVASFSKGYTSIFNMETQQR 649
G +P++ D+ S D ++ ++ + IF ++ ++
Sbjct: 281 GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRK 340
Query: 650 -ILTLESNVDTT-------ANSSCQINRVISHPTLPIS-------ITAHEDRHIKFYDNN 694
L + VD T + Q S P L + + D I
Sbjct: 341 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLG 400
Query: 695 TGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEES 754
+ + + H V ++ DP+G+ L S S D ++++W+++ + CI + AH K+
Sbjct: 401 CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE---- 456
Query: 755 IHDVAFHP---------SKCYIASAGADALAKVF 779
I+ + + P S +ASA D+ +++
Sbjct: 457 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 490
>gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]
Length = 577
Score = 72.4 bits (176), Expect = 2e-12
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 52/339 (15%)
Query: 459 LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGP 518
LR H + A++P+ +L + S D T ++WNL + + ST L + H P
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGG-STQLVLRHCIREGGHDVP 286
Query: 519 ----VLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWG 574
V + ++NG +G DG + W + L L H ++
Sbjct: 287 SNKDVTSLDWNTNGTLLATGSYDGFARIWT------------EDGNLASTLGQHKGPIFA 334
Query: 575 LAYSAAHQRLLSCSADGTLRLWNT-TEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
L ++ +LS D T +W+ T A F+ L +
Sbjct: 335 LKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW--------------- 379
Query: 634 FSKGYTSIFNMETQQRI----LTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIK 689
+ T+ + T I L + V T + ++N + P+ + + +D +K
Sbjct: 380 --QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLK 437
Query: 690 FYDNNTGKLIHSMVAHLEAVTSLAVDPNG---------LYLMSGSHDCSIRLWNLESKTC 740
+ IH + AH + + ++ P G + L S S D ++RLW++E C
Sbjct: 438 IWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVC 497
Query: 741 IQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
T H +E ++ VAF P Y+AS D ++
Sbjct: 498 THTLTKH----QEPVYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/274 (20%), Positives = 107/274 (39%), Gaps = 56/274 (20%)
Query: 558 PSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTE----VAPALSVFNDTKE 613
PS L GH V+ A++ L S S D T R+WN E + L + + +E
Sbjct: 221 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE 280
Query: 614 LG--IPASVDLVSSD----------------------PSHMVASFSKGYTSIFNMETQQR 649
G +P++ D+ S D ++ ++ + IF ++ ++
Sbjct: 281 GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRK 340
Query: 650 -ILTLESNVDTT-------ANSSCQINRVISHPTLPIS-------ITAHEDRHIKFYDNN 694
L + VD T + Q S P L + + D I
Sbjct: 341 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLG 400
Query: 695 TGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEES 754
+ + + H V ++ DP+G+ L S S D ++++W+++ + CI + AH K+
Sbjct: 401 CDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKE---- 456
Query: 755 IHDVAFHP---------SKCYIASAGADALAKVF 779
I+ + + P S +ASA D+ +++
Sbjct: 457 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW 490
>gi|16554629 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 71.6 bits (174), Expect = 3e-12
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 43/323 (13%)
Query: 456 KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAH 515
KFTL H + ++ F P L ++S D +K+W + D + T H
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-----------AYDGKFEKTISGH 86
Query: 516 KGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGL 575
K + V SS+ S D ++ W+ ++ L GH++ V+
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC-----------LKTLKGHSNYVFCC 135
Query: 576 AYSAAHQRLLSCSADGTLRLWN--TTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
++ ++S S D ++R+W+ T + L +D P S + D S +V+S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD------PVSAVHFNRDGSLIVSS 189
Query: 634 FSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDN 693
G I++ + Q + TL +D + + ++ V P + A D +K +D
Sbjct: 190 SYDGLCRIWDTASGQCLKTL---ID---DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 694 NTGKLIHSMVAHLEAVTSLAVD---PNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKK 750
+ GK + + H + + G +++SGS D + +WNL++K +Q+ H
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH--- 300
Query: 751 FEESIHDVAFHPSKCYIASAGAD 773
+ + A HP++ IASA +
Sbjct: 301 -TDVVISTACHPTENIIASAALE 322
Score = 62.8 bits (151), Expect = 1e-09
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 31/263 (11%)
Query: 495 TAPAKKSTSLDVEPIY----TFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNI 550
++ A +S V+P Y T H V V S NGE S D LI+ W
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----- 74
Query: 551 DPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFND 610
YD + G LG +D W S+ L+S S D TL++W+ + L
Sbjct: 75 --YDGKFEKTISGHKLGISDVAW----SSDSNLLVSASDDKTLKIWDVSS-GKCLKTLK- 126
Query: 611 TKELGIPASVDLVSSDP-SHMVASFSKGYT-SIFNMETQQRILTLESNVDTTANSSCQIN 668
G V + +P S+++ S S + I++++T + + TL ++ D S+ N
Sbjct: 127 ----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV--SAVHFN 180
Query: 669 RVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEA-VTSLAVDPNGLYLMSGSHD 727
R S + +++ D + +D +G+ + +++ V+ + PNG Y+++ + D
Sbjct: 181 RDGS-----LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query: 728 CSIRLWNLESKTCIQEFTAHRKK 750
+++LW+ C++ +T H+ +
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKNE 258
Score = 62.4 bits (150), Expect = 2e-09
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 561 LRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASV 620
L+ L GHT AV + +S + L S SAD +++W + ++ +LGI
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGIS--- 91
Query: 621 DLVSSDPSHMVASFSKGYT-SIFNMETQQRILTLE--SNVDTTANSSCQINRVISHPTLP 677
D+ S S+++ S S T I+++ + + + TL+ SN N + Q N ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS----- 146
Query: 678 ISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLES 737
D ++ +D TGK + ++ AH + V+++ + +G ++S S+D R+W+ S
Sbjct: 147 ----GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 738 KTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
C++ + V F P+ YI +A D K++
Sbjct: 203 GQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>gi|16554627 WD repeat domain 5 [Homo sapiens]
Length = 334
Score = 71.6 bits (174), Expect = 3e-12
Identities = 73/323 (22%), Positives = 136/323 (42%), Gaps = 43/323 (13%)
Query: 456 KFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAH 515
KFTL H + ++ F P L ++S D +K+W + D + T H
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-----------AYDGKFEKTISGH 86
Query: 516 KGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGL 575
K + V SS+ S D ++ W+ ++ L GH++ V+
Sbjct: 87 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC-----------LKTLKGHSNYVFCC 135
Query: 576 AYSAAHQRLLSCSADGTLRLWN--TTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVAS 633
++ ++S S D ++R+W+ T + L +D P S + D S +V+S
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD------PVSAVHFNRDGSLIVSS 189
Query: 634 FSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDN 693
G I++ + Q + TL +D + + ++ V P + A D +K +D
Sbjct: 190 SYDGLCRIWDTASGQCLKTL---ID---DDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 694 NTGKLIHSMVAHLEAVTSLAVD---PNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKK 750
+ GK + + H + + G +++SGS D + +WNL++K +Q+ H
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH--- 300
Query: 751 FEESIHDVAFHPSKCYIASAGAD 773
+ + A HP++ IASA +
Sbjct: 301 -TDVVISTACHPTENIIASAALE 322
Score = 62.8 bits (151), Expect = 1e-09
Identities = 63/263 (23%), Positives = 118/263 (44%), Gaps = 31/263 (11%)
Query: 495 TAPAKKSTSLDVEPIY----TFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNI 550
++ A +S V+P Y T H V V S NGE S D LI+ W
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----- 74
Query: 551 DPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFND 610
YD + G LG +D W S+ L+S S D TL++W+ + L
Sbjct: 75 --YDGKFEKTISGHKLGISDVAW----SSDSNLLVSASDDKTLKIWDVSS-GKCLKTLK- 126
Query: 611 TKELGIPASVDLVSSDP-SHMVASFSKGYT-SIFNMETQQRILTLESNVDTTANSSCQIN 668
G V + +P S+++ S S + I++++T + + TL ++ D S+ N
Sbjct: 127 ----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV--SAVHFN 180
Query: 669 RVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEA-VTSLAVDPNGLYLMSGSHD 727
R S + +++ D + +D +G+ + +++ V+ + PNG Y+++ + D
Sbjct: 181 RDGS-----LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query: 728 CSIRLWNLESKTCIQEFTAHRKK 750
+++LW+ C++ +T H+ +
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKNE 258
Score = 62.4 bits (150), Expect = 2e-09
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 561 LRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASV 620
L+ L GHT AV + +S + L S SAD +++W + ++ +LGI
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KLGIS--- 91
Query: 621 DLVSSDPSHMVASFSKGYT-SIFNMETQQRILTLE--SNVDTTANSSCQINRVISHPTLP 677
D+ S S+++ S S T I+++ + + + TL+ SN N + Q N ++S
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS----- 146
Query: 678 ISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLES 737
D ++ +D TGK + ++ AH + V+++ + +G ++S S+D R+W+ S
Sbjct: 147 ----GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 738 KTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
C++ + V F P+ YI +A D K++
Sbjct: 203 GQCLKTLI---DDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
Length = 2627
Score = 70.5 bits (171), Expect = 6e-12
Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 22/277 (7%)
Query: 475 EPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYT-FRAHKGPVLCVVMSSNGEQCYS 533
+ +L +ASED T+++W Q K+ P T R H+GPV C S++G +
Sbjct: 2022 QELLASASEDFTVQLWPRQLLTRPHKAEDF---PCGTELRGHEGPVSCCSFSTDGGSLAT 2078
Query: 534 GGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTL 593
GG D + W+ P P ++ H D V G A++ L+SCS+DG++
Sbjct: 2079 GGRDRSLLCWDVRTPK-------TPVLIHSFPACHRDWVTGCAWT-KDNLLISCSSDGSV 2130
Query: 594 RLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTL 653
LW+ E L F LG ++V V++ H+V+ G +++ + +
Sbjct: 2131 GLWD-PESGQRLGQF-----LGHQSAVSAVAAVEEHVVSVSRDGTLKVWDHQGVELTSIP 2184
Query: 654 ESNVDTTANSSCQINRVISHP-TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSL 712
+ + ++ R P + + +T D + + H+++ H V +
Sbjct: 2185 AHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVRAA 2244
Query: 713 AVDPNGLYLMSGSHDCSIRLWNLESK---TCIQEFTA 746
AV +++ S D S+RLW + + TCI +A
Sbjct: 2245 AVSETSGLMLTASEDGSVRLWQVPKEADDTCIPRSSA 2281
Score = 36.6 bits (83), Expect = 0.092
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 353 KLQDMLANLRDVDELPSLQPSVGSPSRPSSSRLPEHEINRADEVEALTFPPSSGKSFIMG 412
+L L + V + +++ V S SR + ++ +H+ VE + P SG I
Sbjct: 2140 RLGQFLGHQSAVSAVAAVEEHVVSVSRDGTLKVWDHQ-----GVELTSIPAHSGP--ISH 2192
Query: 413 ADEALESELGLGELAGLTVANEADSLTYDIANNKDALRKTWNPKF-----TLRSHFDGIR 467
A+E A + S + D + W+P TL H +R
Sbjct: 2193 CAAAMEPR----------AAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLLGHSGPVR 2242
Query: 468 ALAFHPIEPVLITASEDHTLKMWNLQKTA 496
A A +++TASED ++++W + K A
Sbjct: 2243 AAAVSETSGLMLTASEDGSVRLWQVPKEA 2271
Score = 35.0 bits (79), Expect = 0.27
Identities = 71/323 (21%), Positives = 108/323 (33%), Gaps = 91/323 (28%)
Query: 461 SHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYT--------- 511
+H + A F L+TA ED +++W+ P SL + P +
Sbjct: 1882 AHHGFVAAALFLHAGCQLLTAGEDGKVQVWSGSLGRPRGHLGSLSLSPALSVALSPDGDR 1941
Query: 512 ----FRAHKGPVLCVVMSSNGEQ------------------CYSGGTDGLIQGWNTTNPN 549
+RA + + S G Q SG DG +QGW +
Sbjct: 1942 VAVGYRADGIRIYKISSGSQGAQGQALDVAVSALAWLSPKVLVSGAEDGSLQGWALKECS 2001
Query: 550 IDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWNTTEVAPALSVFN 609
+ + S + P+LG + + + L S S D T++LW P +
Sbjct: 2002 LQ--SLWLLSRFQKPVLG---------LATSQELLASASEDFTVQLW------PRQLLTR 2044
Query: 610 DTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINR 669
K P +L + SFS S+
Sbjct: 2045 PHKAEDFPCGTELRGHEGPVSCCSFSTDGGSL---------------------------- 2076
Query: 670 VISHPTLPISITAHEDRHIKFYDNNTGK---LIHSMVA-HLEAVTSLAVDPNGLYLMSGS 725
T DR + +D T K LIHS A H + VT A + L L+S S
Sbjct: 2077 ----------ATGGRDRSLLCWDVRTPKTPVLIHSFPACHRDWVTGCAWTKDNL-LISCS 2125
Query: 726 HDCSIRLWNLESKTCIQEFTAHR 748
D S+ LW+ ES + +F H+
Sbjct: 2126 SDGSVGLWDPESGQRLGQFLGHQ 2148
>gi|7657439 PCAF associated factor 65 beta isoform a [Homo sapiens]
Length = 589
Score = 70.5 bits (171), Expect = 6e-12
Identities = 75/308 (24%), Positives = 115/308 (37%), Gaps = 49/308 (15%)
Query: 473 PIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCY 532
P +L ++ +K+W+L+ + +DV I+ + C ++ ++
Sbjct: 278 PDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIH--------LACDILEEEDDEDD 329
Query: 533 SGGTDGLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGT 592
+ GT+ I L GH V+ + A LLSCS D +
Sbjct: 330 NAGTEMKI------------------------LRGHCGPVYSTRFLADSSGLLSCSEDMS 365
Query: 593 LRLWNTTEVAPALSVFNDTKELGIPASV-DLVSSDPSHMVASFSKGYTSIFNMETQQRIL 651
+R W+ S N G V DL S S AS S T+ + + R
Sbjct: 366 IRYWDLG------SFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTA--RLWSFDRTY 417
Query: 652 TLESNVDTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTS 711
L A+ C V HP T D+ ++ + G + H V S
Sbjct: 418 PLRIYAGHLADVDC----VKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLS 473
Query: 712 LAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAG 771
LA PNG YL S D ++LW+L S T +E H ++I + F P IASA
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGH----TDNITSLTFSPDSGLIASAS 529
Query: 772 ADALAKVF 779
D +V+
Sbjct: 530 MDNSVRVW 537
Score = 64.3 bits (155), Expect = 4e-10
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 440 YDIANNKDALRKTWN-----PKFTLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQK 494
Y + + D + W+ P H + + FHP L T S D T+++W+ Q+
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 495 TAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTDGLIQGWNTTNPNIDPYD 554
+ F H+GPVL + S NG+ S G D ++ W+ +
Sbjct: 458 G-----------NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS------- 499
Query: 555 SYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLW---NTTEVAPA 604
L L GHTD + L +S + S S D ++R+W NT APA
Sbjct: 500 ----GTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPA 548
Score = 37.7 bits (86), Expect = 0.041
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 459 LRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKT---APAKKSTSLDVEPIYT 511
LR H D I +L F P ++ +AS D+++++W+++ T APA S+S ++ +YT
Sbjct: 506 LRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSS-ELVGVYT 560
>gi|62234461 Notchless gene homolog isoform a [Homo sapiens]
Length = 485
Score = 70.1 bits (170), Expect = 7e-12
Identities = 87/393 (22%), Positives = 146/393 (37%), Gaps = 89/393 (22%)
Query: 458 TLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKG 517
+L H + + ++AF P L + S D T++ W+L P +T + H+
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPH-----------FTCKGHRH 157
Query: 518 PVLCVVMSSNGEQCYSGGTDGLIQGWNTT--------------------------NPNID 551
VL + S +G + SG +G I W+ + NP
Sbjct: 158 WVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR 217
Query: 552 --PYDSYDPSV---------LRGPLLGHTDAV----WG---LAYSA----------AHQR 583
S D SV L GHT +V WG L YSA AH
Sbjct: 218 YVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG 277
Query: 584 LLSCSADGTLRLWNTTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFN 643
+L + G NT ++ ++ E PA + D + + S +N
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYALRTGAFE---PAEASVNPQDLQGSLQELKERALSRYN 334
Query: 644 METQQRILTLESNVDT-----------------TANSSCQINRVISHPTLPISITAHEDR 686
+ Q L S D IN+V+ P I +A D+
Sbjct: 335 LVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDK 394
Query: 687 HIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSHDCSIRLWNLESKTCIQEFTA 746
IK +D TGK + S+ H+ AV +A + L+SGS D ++++W+++++ +
Sbjct: 395 SIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPG 454
Query: 747 HRKKFEESIHDVAFHPSKCYIASAGADALAKVF 779
H + ++ V + P +AS G D +++
Sbjct: 455 H----ADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>gi|13376840 WD repeat domain 61 [Homo sapiens]
Length = 305
Score = 69.3 bits (168), Expect = 1e-11
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 35/296 (11%)
Query: 478 LITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGPVLCVVMSSNGEQCYSGGTD 537
++T S D +K+W + LD++ ++ H+ V+ V +S S D
Sbjct: 35 VVTGSLDDLVKVWKW-------RDERLDLQ--WSLEGHQLGVVSVDISHTLPIAASSSLD 85
Query: 538 GLIQGWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAYSAAHQRLLSCSADGTLRLWN 597
I+ W+ N S+ GP+ DA W LA+S Q L + + G + ++
Sbjct: 86 AHIRLWDLEN------GKQIKSIDAGPV----DA-WTLAFSPDSQYLATGTHVGKVNIFG 134
Query: 598 TTEVAPALSVFNDTKELGIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNV 657
S+ DT+ I + S D ++ + G +IF++ T + + TLE +
Sbjct: 135 VESGKKEYSL--DTRGKFILSIA--YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH- 189
Query: 658 DTTANSSCQINRVISHPTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPN 717
+ I + P + +TA +D +IK YD L ++ H V ++A P+
Sbjct: 190 ------AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 243
Query: 718 GLYLMSGSHDCSIRLWNLESKTCIQEFTAHRKKFEESIHDVAFHPSKCYIASAGAD 773
+ +S S D S+++W++ ++TC+ F H ++ + V ++ + I S G D
Sbjct: 244 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDH----QDQVWGVKYNGNGSKIVSVGDD 295
Score = 43.1 bits (100), Expect = 0.001
Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 458 TLRSHFDGIRALAFHPIEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKG 517
TL H IR+L F P +L+TAS+D +K++++Q A T H
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG-----------TLSGHAS 233
Query: 518 PVLCVVMSSNGEQCYSGGTDGLIQGWNT-TNPNIDPYDSYDPSVLRGPLLGHTDAVWGLA 576
VL V + S +D ++ W+ T + + H D VWG+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF------------FDHQDQVWGVK 281
Query: 577 YSAAHQRLLSCSADGTLRLWN 597
Y+ +++S D + +++
Sbjct: 282 YNGNGSKIVSVGDDQEIHIYD 302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,314,394
Number of Sequences: 37866
Number of extensions: 1411282
Number of successful extensions: 8209
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 5624
Number of HSP's gapped (non-prelim): 1877
length of query: 780
length of database: 18,247,518
effective HSP length: 110
effective length of query: 670
effective length of database: 14,082,258
effective search space: 9435112860
effective search space used: 9435112860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.