TRIM28 31555

Name: TRIM28	Sequence: fasta or formatted (835aa)		NCBI GI: 5032179
Description: tripartite motif-containing 28 protein		Referenced in: Nonhistone Chromosomal Proteins PHD Finger Proteins Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 94 5 C cysteine 3.7 31 2 D aspartate 5.3 44 2 E glutamate 7.3 61 3 F phenylalanine 2.6 22 2 G glycine 8.6 72 3 H histidine 2.4 20 1 I isoleucine 2.0 17 2 K lysine 5.0 42 2 L leucine 8.6 72 3 M methionine 1.9 16 1 N asparagine 2.2 18 2 P proline 7.4 62 3 Q glutamine 4.8 40 2 R arginine 5.0 42 1 S serine 8.9 74 2 T threonine 5.1 43 2 V valine 6.0 50 2 W tryptophan 0.6 5 1 Y tyrosine 1.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 28 protein TRIM33 0.189 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.189 tripartite motif-containing 33 protein isoform alpha... TRIM24 0.171 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.171 transcriptional intermediary factor 1 alpha isoform ... TRIM66 0.085 tripartite motif-containing 66 TRIM71 0.050 tripartite motif-containing 71 TRIM45 0.047 tripartite motif-containing 45 isoform 2 TRIM45 0.047 tripartite motif-containing 45 isoform 1 TRIM56 0.046 tripartite motif-containing 56 TRIM3 0.032 tripartite motif-containing 3 TRIM3 0.032 tripartite motif-containing 3 TRIM2 0.031 tripartite motif-containing 2 isoform 1 PML 0.031 promyelocytic leukemia protein isoform 11 PML 0.031 promyelocytic leukemia protein isoform 2 PML 0.031 promyelocytic leukemia protein isoform 9 PML 0.031 promyelocytic leukemia protein isoform 8 PML 0.031 promyelocytic leukemia protein isoform 6 PML 0.031 promyelocytic leukemia protein isoform 7 PML 0.031 promyelocytic leukemia protein isoform 10 PML 0.031 promyelocytic leukemia protein isoform 1 PML 0.031 promyelocytic leukemia protein isoform 5 TRIM42 0.031 tripartite motif-containing 42 MID2 0.031 midline 2 isoform 2 MID2 0.031 midline 2 isoform 1 TRIM2 0.030 tripartite motif-containing 2 isoform 2 SP110 0.024 SP110 nuclear body protein isoform c RNF207 0.023 ring finger protein 207 SP140 0.023 SP140 nuclear body protein isoform 1 SP140L 0.023 SP140 nuclear body protein-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.